Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AL354710.1-201ENST00000453641 246 ntBASIC5.59□□□□□ -1.51
COPAP53621 AL035407.2-201ENST00000454090 378 ntBASIC5.59□□□□□ -1.51
COPAP53621 RN7SL610P-201ENST00000463845 291 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC096741.1-201ENST00000472250 846 ntBASIC5.59□□□□□ -1.51
COPAP53621 RN7SL222P-201ENST00000476452 299 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.59□□□□□ -1.51
COPAP53621 AC020699.1-201ENST00000505161 445 ntBASIC5.59□□□□□ -1.51
COPAP53621 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.59□□□□□ -1.51
COPAP53621 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 RN7SKP99-201ENST00000517028 307 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC5.59□□□□□ -1.51
COPAP53621 MTND2P38-201ENST00000522536 667 ntBASIC5.59□□□□□ -1.51
COPAP53621 IGHVIII-76-1-201ENST00000523776 286 ntBASIC5.59□□□□□ -1.51
COPAP53621 OR10V3P-201ENST00000525712 725 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.59□□□□□ -1.51
COPAP53621 MORF4L1P3-201ENST00000525966 950 ntBASIC5.59□□□□□ -1.51
COPAP53621 LRRC34P1-201ENST00000542742 915 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC008083.2-201ENST00000546707 476 ntBASIC5.59□□□□□ -1.51
COPAP53621 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.59□□□□□ -1.51
COPAP53621 AC025260.1-201ENST00000548858 430 ntBASIC5.59□□□□□ -1.51
COPAP53621 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPAP53621 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
COPAP53621 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.59□□□□□ -1.51
COPAP53621 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 RNU4-5P-201ENST00000607255 135 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC010632.3-201ENST00000611377 369 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC037198.3-201ENST00000616754 526 ntBASIC5.59□□□□□ -1.51
COPAP53621 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC139713.2-210ENST00000641741 992 ntBASIC5.59□□□□□ -1.51
COPAP53621 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.59□□□□□ -1.51
COPAP53621 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
COPAP53621 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 BX005019.1-201ENST00000561881 1810 ntBASIC5.59□□□□□ -1.51
COPAP53621 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
COPAP53621 CCT8P1-201ENST00000413611 1657 ntBASIC5.59□□□□□ -1.52
COPAP53621 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
COPAP53621 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
COPAP53621 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
COPAP53621 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.59□□□□□ -1.52
COPAP53621 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 AC026523.2-201ENST00000625039 7739 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC104964.3-201ENST00000606115 2860 ntBASIC5.58□□□□□ -1.52
COPAP53621 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPAP53621 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 AC092376.2-201ENST00000622621 4116 ntBASIC5.58□□□□□ -1.52
COPAP53621 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 METTL21EP-201ENST00000298105 713 ntBASIC5.58□□□□□ -1.52
COPAP53621 U3.2-201ENST00000362981 210 ntBASIC5.58□□□□□ -1.52
COPAP53621 RN7SKP224-201ENST00000364140 325 ntBASIC5.58□□□□□ -1.52
COPAP53621 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPAP53621 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
COPAP53621 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 MIR937-201ENST00000401271 86 ntBASIC5.58□□□□□ -1.52
COPAP53621 AL009179.1-201ENST00000406085 265 ntBASIC5.58□□□□□ -1.52
COPAP53621 RN7SKP222-201ENST00000410651 315 ntBASIC5.58□□□□□ -1.52
COPAP53621 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.58□□□□□ -1.52
COPAP53621 AL592310.1-201ENST00000414330 671 ntBASIC5.58□□□□□ -1.52
COPAP53621 USP9YP21-201ENST00000420603 432 ntBASIC5.58□□□□□ -1.52
COPAP53621 AL133325.1-201ENST00000421090 382 ntBASIC5.58□□□□□ -1.52
COPAP53621 OR5M12P-201ENST00000423388 929 ntBASIC5.58□□□□□ -1.52
COPAP53621 CETN4P-201ENST00000432407 469 ntBASIC5.58□□□□□ -1.52
COPAP53621 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 SEPT14P24-201ENST00000447236 180 ntBASIC5.58□□□□□ -1.52
COPAP53621 AL596266.1-201ENST00000448132 400 ntBASIC5.58□□□□□ -1.52
COPAP53621 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
COPAP53621 SNORD11.1-201ENST00000459482 85 ntBASIC5.58□□□□□ -1.52
COPAP53621 RPS12P31-201ENST00000491419 398 ntBASIC5.58□□□□□ -1.52
COPAP53621 RPS17P5-201ENST00000498293 408 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.58□□□□□ -1.52
COPAP53621 SEPT10P1-201ENST00000517342 1162 ntBASIC5.58□□□□□ -1.52
COPAP53621 HMGB1P1-201ENST00000522557 636 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.58□□□□□ -1.52
COPAP53621 LRRC6P1-201ENST00000532188 885 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC137627.1-201ENST00000545761 289 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.58□□□□□ -1.52
COPAP53621 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC5.58□□□□□ -1.52
COPAP53621 OR11H3P-201ENST00000554547 982 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC5.58□□□□□ -1.52
COPAP53621 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.58□□□□□ -1.52
COPAP53621 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC5.58□□□□□ -1.52
COPAP53621 AC234772.3-201ENST00000602277 528 ntBASIC5.58□□□□□ -1.52
COPAP53621 AC022022.2-201ENST00000602989 360 ntBASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms