Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN3P51790 STK31-201ENST00000354639 3596 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN3P51790 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
CLCN3P51790 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
CLCN3P51790 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCN3P51790 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 RNU4-7P-201ENST00000364758 141 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 RNU6-1263P-201ENST00000384601 106 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
CLCN3P51790 FAR2P2-201ENST00000413041 594 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 FAR2P4-202ENST00000425399 584 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AL136231.1-201ENST00000429407 730 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 TPT1P13-201ENST00000449760 499 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AC009220.1-201ENST00000451614 275 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.34□□□□□ -1.55
CLCN3P51790 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 AC093166.2-201ENST00000455969 1017 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AC096741.1-201ENST00000472250 846 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 AC015908.1-201ENST00000478739 476 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 NPM1P17-201ENST00000479221 602 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.34□□□□□ -1.55
CLCN3P51790 IGKV1-32-201ENST00000519290 311 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.34□□□□□ -1.55
CLCN3P51790 OR5M2P-201ENST00000529003 936 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC5.34□□□□□ -1.55
CLCN3P51790 AC021483.2-201ENST00000567415 758 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 ELOCP28-201ENST00000590044 317 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 BNIP3P19-201ENST00000605397 577 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 AC120053.1-201ENST00000607706 736 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 MIR1264-201ENST00000616374 69 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 PROS2P-201ENST00000474651 1951 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
CLCN3P51790 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.34□□□□□ -1.55
CLCN3P51790 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
CLCN3P51790 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.34□□□□□ -1.56
CLCN3P51790 AC007342.7-201ENST00000624610 2337 ntBASIC5.34□□□□□ -1.56
CLCN3P51790 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
CLCN3P51790 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 AC007382.1-201ENST00000624376 2618 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 MAPK10-263ENST00000641052 4307 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC5.33□□□□□ -1.56
CLCN3P51790 RNU6-31P-201ENST00000384388 108 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 MIR298-201ENST00000401212 88 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 RN7SKP106-201ENST00000410832 272 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 RNU2-22P-201ENST00000411266 212 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC013429.2-201ENST00000418798 781 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC092570.3-201ENST00000420113 693 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AL645608.4-201ENST00000423619 154 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 AL353898.1-201ENST00000444055 238 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 CALM1P2-201ENST00000452941 448 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC069277.2-201ENST00000454211 432 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 RPS5P7-201ENST00000456664 608 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 AC018635.1-201ENST00000468292 1030 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 RPL5P22-201ENST00000480199 884 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 EEF1A1P25-201ENST00000495704 1267 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 CAB39P1-201ENST00000502277 460 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 MYL12BP2-201ENST00000503948 512 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 AC091868.1-201ENST00000508746 304 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC026782.2-201ENST00000510845 636 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 HMGN1P15-201ENST00000513870 295 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 RNU6-1102P-201ENST00000516149 96 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 RNU2-30P-201ENST00000516209 141 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 MTCYBP19-201ENST00000517463 1124 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.33□□□□□ -1.56
CLCN3P51790 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC5.33□□□□□ -1.56
CLCN3P51790 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 GSTP1P1-201ENST00000548078 319 ntBASIC5.33□□□□□ -1.56
CLCN3P51790 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CLCN3P51790 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.33□□□□□ -1.56
CLCN3P51790 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC5.33□□□□□ -1.56
CLCN3P51790 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms