Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 SUCLA2P2-201ENST00000417269 1309 ntBASIC6.38□□□□□ -1.39
MRE11P49959 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 CASC19-248ENST00000641674 1356 ntBASIC6.38□□□□□ -1.39
MRE11P49959 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 AC008627.1-201ENST00000517511 1704 ntBASIC6.38□□□□□ -1.39
MRE11P49959 CDC27P2-201ENST00000425026 1922 ntBASIC6.38□□□□□ -1.39
MRE11P49959 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 STX3-208ENST00000641815 3236 ntBASIC6.38□□□□□ -1.39
MRE11P49959 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.38□□□□□ -1.39
MRE11P49959 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 PCAT14-202ENST00000627127 3935 ntBASIC6.38□□□□□ -1.39
MRE11P49959 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
MRE11P49959 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC6.37□□□□□ -1.39
MRE11P49959 AC112198.2-201ENST00000426589 6996 ntBASIC6.37□□□□□ -1.39
MRE11P49959 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 NEPNP-201ENST00000404786 1371 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC008432.1-201ENST00000615912 1320 ntBASIC6.37□□□□□ -1.39
MRE11P49959 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
MRE11P49959 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 TAF9BP2-201ENST00000400856 499 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AL359643.1-201ENST00000404109 423 ntBASIC6.37□□□□□ -1.39
MRE11P49959 SETP15-201ENST00000412724 337 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC6.37□□□□□ -1.39
MRE11P49959 AL449283.1-202ENST00000418249 604 ntBASIC6.37□□□□□ -1.39
MRE11P49959 USP9YP21-201ENST00000420603 432 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC104333.2-201ENST00000422630 192 ntBASIC6.37□□□□□ -1.39
MRE11P49959 MTCO1P43-201ENST00000431831 488 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.37□□□□□ -1.39
MRE11P49959 MTCYBP12-201ENST00000440559 1134 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 ZNF886P-201ENST00000450781 723 ntBASIC6.37□□□□□ -1.39
MRE11P49959 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 RPS23P2-201ENST00000463671 415 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC6.37□□□□□ -1.39
MRE11P49959 IGBP1P4-201ENST00000503202 879 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 SCARNA18.1-201ENST00000516330 83 ntBASIC6.37□□□□□ -1.39
MRE11P49959 CDC42P3-201ENST00000518493 633 ntBASIC6.37□□□□□ -1.39
MRE11P49959 OR5AM1P-201ENST00000532136 1032 ntBASIC6.37□□□□□ -1.39
MRE11P49959 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 DUXAP6-201ENST00000553858 601 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 AC104229.1-201ENST00000561364 255 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 AC005244.1-201ENST00000582566 339 ntBASIC6.37□□□□□ -1.39
MRE11P49959 Z82195.1-201ENST00000604558 398 ntBASIC6.37□□□□□ -1.39
MRE11P49959 uc_338.18-201ENST00000615451 175 ntBASIC6.37□□□□□ -1.39
MRE11P49959 AC104985.3-201ENST00000623479 597 ntBASIC6.37□□□□□ -1.39
MRE11P49959 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.37□□□□□ -1.39
MRE11P49959 MIR193BHG-214ENST00000641765 509 ntBASIC6.37□□□□□ -1.39
MRE11P49959 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
MRE11P49959 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC6.37□□□□□ -1.39
MRE11P49959 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.37□□□□□ -1.39
MRE11P49959 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
MRE11P49959 CYP4F29P-201ENST00000420685 446 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AC093155.2-201ENST00000420734 937 ntBASIC6.36□□□□□ -1.39
MRE11P49959 OR5M12P-201ENST00000423388 929 ntBASIC6.36□□□□□ -1.39
MRE11P49959 RPL7P56-201ENST00000429441 717 ntBASIC6.36□□□□□ -1.39
MRE11P49959 CEACAMP9-201ENST00000442990 513 ntBASIC6.36□□□□□ -1.39
MRE11P49959 EEF1B2P5-201ENST00000444820 548 ntBASIC6.36□□□□□ -1.39
MRE11P49959 MTND2P28-201ENST00000457540 1044 ntBASIC6.36□□□□□ -1.39
MRE11P49959 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 RAP1BP2-201ENST00000478270 544 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AC091544.1-201ENST00000484702 348 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AK4P6-201ENST00000505168 528 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.36□□□□□ -1.39
MRE11P49959 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 GAPDHP71-201ENST00000511530 1003 ntBASIC6.36□□□□□ -1.39
MRE11P49959 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.36□□□□□ -1.39
MRE11P49959 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.36□□□□□ -1.39
MRE11P49959 MTND4P33-201ENST00000556706 766 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AGGF1P7-201ENST00000562369 913 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC6.36□□□□□ -1.39
MRE11P49959 RN7SL435P-201ENST00000584418 282 ntBASIC6.36□□□□□ -1.39
MRE11P49959 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.36□□□□□ -1.39
MRE11P49959 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
MRE11P49959 AC119751.7-201ENST00000600494 245 ntBASIC6.36□□□□□ -1.39
MRE11P49959 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC6.36□□□□□ -1.39
MRE11P49959 Z95327.3-201ENST00000610385 572 ntBASIC6.36□□□□□ -1.39
MRE11P49959 PART1_2.1-201ENST00000612397 250 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms