Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC079741.1-201ENST00000321498 212 ntBASIC5.07□□□□□ -1.6
LHX1P48742 SNORD115-48-201ENST00000364764 76 ntBASIC5.07□□□□□ -1.6
LHX1P48742 SNORD51.1-201ENST00000365405 77 ntBASIC5.07□□□□□ -1.6
LHX1P48742 RNU6-729P-201ENST00000384399 107 ntBASIC5.07□□□□□ -1.6
LHX1P48742 MIR192-201ENST00000384915 110 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AL356057.1-202ENST00000402263 756 ntBASIC5.07□□□□□ -1.6
LHX1P48742 RPS16P5-201ENST00000406501 404 ntBASIC5.07□□□□□ -1.6
LHX1P48742 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.07□□□□□ -1.6
LHX1P48742 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.07□□□□□ -1.6
LHX1P48742 AL357078.2-201ENST00000416486 427 ntBASIC5.07□□□□□ -1.6
LHX1P48742 VN1R37P-201ENST00000419096 748 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AC006065.1-201ENST00000422539 802 ntBASIC5.07□□□□□ -1.6
LHX1P48742 MTND4P24-201ENST00000424002 397 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AL390879.2-203ENST00000426943 1121 ntBASIC5.07□□□□□ -1.6
LHX1P48742 TCEA1P3-201ENST00000443005 880 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC5.07□□□□□ -1.6
LHX1P48742 MTCO1P31-201ENST00000506355 492 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.07□□□□□ -1.6
LHX1P48742 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC5.07□□□□□ -1.6
LHX1P48742 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.07□□□□□ -1.6
LHX1P48742 AL110118.1-201ENST00000553543 400 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AC093249.4-201ENST00000564755 259 ntBASIC5.07□□□□□ -1.6
LHX1P48742 AL135786.2-201ENST00000608422 615 ntBASIC5.07□□□□□ -1.6
LHX1P48742 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.07□□□□□ -1.6
LHX1P48742 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
LHX1P48742 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
LHX1P48742 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
LHX1P48742 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 AC100778.3-201ENST00000580060 1750 ntBASIC5.06□□□□□ -1.6
LHX1P48742 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.06□□□□□ -1.6
LHX1P48742 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.06□□□□□ -1.6
LHX1P48742 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LHX1P48742 RNU1-82P-201ENST00000390851 165 ntBASIC5.06□□□□□ -1.6
LHX1P48742 RPS4XP9-201ENST00000405151 780 ntBASIC5.06□□□□□ -1.6
LHX1P48742 RN7SKP267-201ENST00000410381 285 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AL591848.1-201ENST00000413092 322 ntBASIC5.06□□□□□ -1.6
LHX1P48742 RANP4-201ENST00000413361 655 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 TMBIM7P-201ENST00000418074 855 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC019050.1-201ENST00000418508 492 ntBASIC5.06□□□□□ -1.6
LHX1P48742 FABP7P1-201ENST00000424004 391 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.06□□□□□ -1.6
LHX1P48742 AC093716.1-201ENST00000435923 377 ntBASIC5.06□□□□□ -1.6
LHX1P48742 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.06□□□□□ -1.6
LHX1P48742 AL353898.1-201ENST00000444055 238 ntBASIC5.06□□□□□ -1.6
LHX1P48742 BTF3P6-201ENST00000448054 499 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AL353718.1-201ENST00000451028 517 ntBASIC5.06□□□□□ -1.6
LHX1P48742 RPL5P13-201ENST00000462840 709 ntBASIC5.06□□□□□ -1.6
LHX1P48742 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LHX1P48742 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.06□□□□□ -1.6
LHX1P48742 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
LHX1P48742 AP006289.1-201ENST00000538089 277 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.06□□□□□ -1.6
LHX1P48742 BNIP3P1-201ENST00000547295 580 ntBASIC5.06□□□□□ -1.6
LHX1P48742 CR383656.6-201ENST00000550518 394 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC087888.1-201ENST00000550884 1254 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 RN7SL652P-201ENST00000577769 300 ntBASIC5.06□□□□□ -1.6
LHX1P48742 RN7SL690P-201ENST00000582087 240 ntBASIC5.06□□□□□ -1.6
LHX1P48742 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 RPL27-207ENST00000590864 569 ntTSL 2 BASIC5.06□□□□□ -1.6
LHX1P48742 AC068790.7-201ENST00000602347 528 ntBASIC5.06□□□□□ -1.6
LHX1P48742 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.06□□□□□ -1.6
LHX1P48742 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AL451049.1-201ENST00000608672 497 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AC135803.1-201ENST00000608748 565 ntBASIC5.06□□□□□ -1.6
LHX1P48742 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 AC011815.3-201ENST00000624194 473 ntBASIC5.06□□□□□ -1.6
LHX1P48742 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 AC073869.7-201ENST00000640874 297 ntBASIC5.06□□□□□ -1.6
LHX1P48742 AL034370.1-201ENST00000397254 1590 ntBASIC5.06□□□□□ -1.6
LHX1P48742 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
LHX1P48742 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.06□□□□□ -1.6
LHX1P48742 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
LHX1P48742 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
LHX1P48742 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.05□□□□□ -1.6
LHX1P48742 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms