Protein–RNA interactions for Protein: P48729

CSNK1A1, Casein kinase I isoform alpha, humanhuman

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1P48729 NF1P10-201ENST00000613227 742 ntBASIC4.23□□□□□ -1.73
CSNK1A1P48729 AL356274.1-201ENST00000617064 410 ntBASIC4.23□□□□□ -1.73
CSNK1A1P48729 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
CSNK1A1P48729 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1A1P48729 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1A1P48729 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.23□□□□□ -1.73
CSNK1A1P48729 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1A1P48729 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1A1P48729 HSPD1P11-201ENST00000508643 1702 ntBASIC4.23□□□□□ -1.73
CSNK1A1P48729 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CSNK1A1P48729 CASC19-204ENST00000641001 2055 ntBASIC4.23□□□□□ -1.73
CSNK1A1P48729 MAPK10-286ENST00000641208 8747 ntBASIC4.23□□□□□ -1.73
CSNK1A1P48729 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.23□□□□□ -1.73
CSNK1A1P48729 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 VN2R3P-201ENST00000422626 1412 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 DHX9P1-201ENST00000436565 3076 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC007382.1-201ENST00000624376 2618 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 MIR365B-201ENST00000362317 111 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 RNU1-82P-201ENST00000390851 165 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AP000580.1-201ENST00000404439 358 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL358176.3-201ENST00000420757 454 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL590609.2-201ENST00000421430 368 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC099336.2-201ENST00000422457 254 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 RPL23AP4-201ENST00000427757 463 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 OR2B7P-201ENST00000429302 934 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 RPS26P4-201ENST00000431743 355 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL353597.2-202ENST00000434901 373 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 PSMD10P3-201ENST00000437000 448 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 HIGD1AP8-201ENST00000453927 274 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC099560.2-201ENST00000457554 255 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC091868.1-201ENST00000508746 304 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 LINC02236-201ENST00000508881 552 ntTSL 4 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AP001922.4-201ENST00000526967 290 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC022882.1-201ENST00000532142 501 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 PCNPP1-201ENST00000552501 511 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 FKBP1BP1-201ENST00000553366 325 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 RNF138P2-201ENST00000603490 592 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC005084.1-201ENST00000605160 304 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC133644.2-201ENST00000608142 540 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AC087385.3-201ENST00000620477 187 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.22□□□□□ -1.73
CSNK1A1P48729 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL442639.1-201ENST00000625030 1899 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 AL451142.2-201ENST00000429076 2090 ntBASIC4.22□□□□□ -1.73
CSNK1A1P48729 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSNK1A1P48729 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
CSNK1A1P48729 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
CSNK1A1P48729 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1A1P48729 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1A1P48729 OR52B1P-201ENST00000316506 909 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC019155.1-201ENST00000382242 574 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 AL109941.1-201ENST00000401925 229 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AL592291.1-201ENST00000403830 352 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AL080315.1-201ENST00000406055 466 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 RNU2-50P-201ENST00000410494 143 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 EIF4A1P3-201ENST00000411521 244 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC092570.3-201ENST00000420113 693 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 EIF4A1P1-201ENST00000420241 934 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 VN1R54P-201ENST00000435210 1049 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC073648.4-201ENST00000442655 781 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 CASP3P1-201ENST00000446037 609 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 RPL7P61-201ENST00000451721 751 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 SEPT14P1-201ENST00000458703 648 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC063943.1-201ENST00000465434 453 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AL133372.1-201ENST00000493565 745 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 ARL4AP1-201ENST00000503220 705 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.21□□□□□ -1.74
CSNK1A1P48729 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
CSNK1A1P48729 SNORD116-30-201ENST00000516468 85 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 NPM1P6-201ENST00000521088 871 ntBASIC4.21□□□□□ -1.74
CSNK1A1P48729 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms