Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC096992.1-201ENST00000459808 709 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 SNORA70.11-201ENST00000515987 138 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 SNORA70.13-201ENST00000516116 138 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 RNA5SP228-201ENST00000516232 133 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 snoZ278.1-201ENST00000517059 112 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 OR11J2P-201ENST00000555298 907 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 MTND3P12-201ENST00000559068 328 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC018552.1-201ENST00000562099 811 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC009097.3-201ENST00000563557 1018 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 AL163952.1-202ENST00000569625 600 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 OR1F2P-201ENST00000570470 933 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 AC009163.6-201ENST00000612367 342 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 U6.48-201ENST00000618523 106 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AP000484.1-201ENST00000620067 1252 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC000095.2-202ENST00000637415 154 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 AC023421.1-201ENST00000590535 1785 ntBASIC6.35□□□□□ -1.39
CNGA1P29973 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
CNGA1P29973 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
CNGA1P29973 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
CNGA1P29973 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.35□□□□□ -1.39
CNGA1P29973 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC138393.1-206ENST00000540997 1886 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 MTND4P8-201ENST00000514997 1362 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNGA1P29973 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
CNGA1P29973 MIR525-201ENST00000384978 85 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.34□□□□□ -1.39
CNGA1P29973 AL356320.2-201ENST00000417263 507 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.34□□□□□ -1.39
CNGA1P29973 RPS24P8-201ENST00000431490 402 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 VN1R54P-201ENST00000435210 1049 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC069528.1-202ENST00000482888 637 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC6.34□□□□□ -1.39
CNGA1P29973 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 AL020997.3-201ENST00000602843 359 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AC107952.2-201ENST00000606048 486 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AC021755.4-201ENST00000616620 456 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 AC019226.2-201ENST00000625973 424 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 AC011493.1-201ENST00000596753 1632 ntBASIC6.34□□□□□ -1.39
CNGA1P29973 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
CNGA1P29973 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
CNGA1P29973 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNGA1P29973 AC006042.3-201ENST00000454684 1469 ntBASIC6.34□□□□□ -1.4
CNGA1P29973 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNGA1P29973 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.4
CNGA1P29973 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNGA1P29973 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CNGA1P29973 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
CNGA1P29973 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.33□□□□□ -1.4
CNGA1P29973 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
CNGA1P29973 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
CNGA1P29973 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.33□□□□□ -1.4
CNGA1P29973 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
CNGA1P29973 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
CNGA1P29973 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC6.33□□□□□ -1.4
CNGA1P29973 RNU4-92P-201ENST00000363783 136 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 RNA5SP335-201ENST00000363817 110 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 RN7SKP6-201ENST00000364795 319 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.33□□□□□ -1.4
CNGA1P29973 MIR551A-201ENST00000385042 96 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 SNORA11C-201ENST00000408532 129 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 RN7SKP17-201ENST00000411242 351 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC6.33□□□□□ -1.4
CNGA1P29973 Z75741.2-201ENST00000417272 1167 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 AC092651.1-201ENST00000426110 312 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 FABP7P2-201ENST00000429946 379 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.33□□□□□ -1.4
CNGA1P29973 AC022431.1-201ENST00000450941 438 ntBASIC6.33□□□□□ -1.4
CNGA1P29973 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 92.4 ms