Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 AC106871.1-201ENST00000568324 3102 ntBASIC5.25□□□□□ -1.57
COL4A5P29400 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
COL4A5P29400 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
COL4A5P29400 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
COL4A5P29400 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
COL4A5P29400 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A5P29400 RNU1-63P-201ENST00000383902 164 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 RNU11-4P-201ENST00000391149 133 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A5P29400 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A5P29400 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.24□□□□□ -1.57
COL4A5P29400 TRMT10BP1-201ENST00000519377 943 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 AL121834.1-201ENST00000572284 509 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AC017100.2-201ENST00000584628 355 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AC244100.1-202ENST00000621554 382 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 FRG1EP-201ENST00000634469 770 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 CASC19-206ENST00000641028 1430 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AL355852.1-201ENST00000454081 1771 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A5P29400 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.24□□□□□ -1.57
COL4A5P29400 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A5P29400 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
COL4A5P29400 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A5P29400 SNORA73.2-201ENST00000364946 201 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 RPS20P14-201ENST00000412545 360 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 OR8F1P-201ENST00000425243 930 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 ARAFP2-201ENST00000440565 559 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC5.24□□□□□ -1.57
COL4A5P29400 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 OR7E10P-201ENST00000526420 991 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.24□□□□□ -1.57
COL4A5P29400 AC012468.1-201ENST00000604888 430 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A5P29400 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC5.24□□□□□ -1.57
COL4A5P29400 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COL4A5P29400 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COL4A5P29400 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
COL4A5P29400 FAM91A3P-201ENST00000456826 2544 ntBASIC5.24□□□□□ -1.57
COL4A5P29400 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A5P29400 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A5P29400 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A5P29400 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 PVALB-202ENST00000404171 422 ntTSL 2 BASIC5.23□□□□□ -1.57
COL4A5P29400 TPT1P2-201ENST00000413105 503 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 AC104333.2-201ENST00000422630 192 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A5P29400 YME1L1P1-201ENST00000429435 297 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.23□□□□□ -1.57
COL4A5P29400 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.23□□□□□ -1.57
COL4A5P29400 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.23□□□□□ -1.57
COL4A5P29400 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.23□□□□□ -1.57
COL4A5P29400 OR4A2P-201ENST00000527276 913 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 CR392039.5-201ENST00000623201 510 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
COL4A5P29400 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COL4A5P29400 AC092376.2-201ENST00000622621 4116 ntBASIC5.23□□□□□ -1.57
COL4A5P29400 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A5P29400 DNM1P47-203ENST00000571780 12667 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
COL4A5P29400 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
COL4A5P29400 AL139039.2-201ENST00000407436 479 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 RNA5SP246-201ENST00000458909 119 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 AC091564.1-201ENST00000464563 479 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A5P29400 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A5P29400 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.22□□□□□ -1.57
COL4A5P29400 AC099669.2-201ENST00000616549 437 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.22□□□□□ -1.57
COL4A5P29400 FP325313.1-201ENST00000638228 703 ntBASIC5.22□□□□□ -1.57
COL4A5P29400 AC100778.3-201ENST00000580060 1750 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms