Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC005351.1-201ENST00000511152 786 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 NDUFB4P12-201ENST00000513465 390 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC079905.1-201ENST00000549280 475 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AC145350.1-201ENST00000567426 208 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AC074051.3-201ENST00000570238 358 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 DUXAP3-201ENST00000603616 594 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AC025811.1-201ENST00000604312 472 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AC080013.3-201ENST00000606839 578 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AC108865.2-201ENST00000606881 432 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.11□□□□□ -1.59
TNFSF4P23510 AC005332.6-201ENST00000613178 446 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AP000484.1-201ENST00000620067 1252 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 MIR4278-201ENST00000636094 69 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 MKKS-204ENST00000639674 192 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF4P23510 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
TNFSF4P23510 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF4P23510 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.11□□□□□ -1.59
TNFSF4P23510 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF4P23510 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF4P23510 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
TNFSF4P23510 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
TNFSF4P23510 SAGE2P-201ENST00000420011 2126 ntBASIC5.11□□□□□ -1.59
TNFSF4P23510 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFSF4P23510 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
TNFSF4P23510 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 RNU5D-1-201ENST00000363299 116 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 CD2-201ENST00000369477 478 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 AL078604.1-201ENST00000404609 466 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC016739.1-201ENST00000405359 345 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 RPL23AP47-201ENST00000408017 460 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 SNORA77.2-201ENST00000408571 112 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC5.1□□□□□ -1.59
TNFSF4P23510 MTND5P31-201ENST00000419366 1374 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC006960.1-201ENST00000419980 153 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC104454.1-201ENST00000421341 1401 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 AC099677.3-201ENST00000427081 395 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.1□□□□□ -1.59
TNFSF4P23510 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 RPL7P34-201ENST00000433316 712 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 ATP5F1P1-201ENST00000433775 569 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 BX679664.2-201ENST00000439282 283 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 CUBNP2-201ENST00000443534 1139 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 BRAFP1-201ENST00000445336 2703 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 PTMAP3-201ENST00000447474 330 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 MYO5BP2-201ENST00000449815 1277 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AL162739.1-201ENST00000450606 307 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 DNAJB5P1-201ENST00000454004 806 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 VN1R40P-201ENST00000455196 941 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 ACA64.4-201ENST00000459070 127 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 UBFD1P1-201ENST00000473259 814 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC099521.1-201ENST00000482557 334 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.1□□□□□ -1.59
TNFSF4P23510 KLRA1P-201ENST00000503499 986 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC008629.2-201ENST00000503783 483 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TNFSF4P23510 AC021106.1-201ENST00000509020 1058 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC079395.1-201ENST00000510981 262 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 MTCO1P30-201ENST00000515244 580 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AL671862.1-201ENST00000515851 349 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 SNORD116-26-201ENST00000516006 96 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC5.1□□□□□ -1.59
TNFSF4P23510 AC060775.1-201ENST00000518241 520 ntBASIC5.1□□□□□ -1.59
TNFSF4P23510 ASNSP1-201ENST00000518311 1939 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms