Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 AC091390.1-201ENST00000433904 331 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC093414.1-201ENST00000434712 514 ntBASIC4.14□□□□□ -1.75
USF1P22415 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
USF1P22415 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 MRPL35P2-201ENST00000448009 511 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 AC234781.3-201ENST00000452540 973 ntBASIC4.14□□□□□ -1.75
USF1P22415 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 AL133244.1-201ENST00000456007 258 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 AC022336.1-201ENST00000475510 337 ntBASIC4.14□□□□□ -1.75
USF1P22415 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 AC093720.1-201ENST00000505681 714 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC113430.1-201ENST00000506872 718 ntBASIC4.14□□□□□ -1.75
USF1P22415 ENPP7P9-201ENST00000514456 627 ntBASIC4.14□□□□□ -1.75
USF1P22415 RN7SKP276-201ENST00000516242 268 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC105031.1-201ENST00000518550 476 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.14□□□□□ -1.75
USF1P22415 IGKV2D-10-201ENST00000520194 281 ntBASIC4.14□□□□□ -1.75
USF1P22415 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 AP001880.2-201ENST00000538233 448 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.14□□□□□ -1.75
USF1P22415 NDUFB4P11-201ENST00000560510 395 ntBASIC4.14□□□□□ -1.75
USF1P22415 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.14□□□□□ -1.75
USF1P22415 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
USF1P22415 AL672167.1-204ENST00000641875 3017 ntBASIC4.14□□□□□ -1.75
USF1P22415 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.14□□□□□ -1.75
USF1P22415 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
USF1P22415 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
USF1P22415 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 SYT14P1-202ENST00000600441 1448 ntBASIC4.13□□□□□ -1.75
USF1P22415 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 SNORA70.10-201ENST00000384515 134 ntBASIC4.13□□□□□ -1.75
USF1P22415 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
USF1P22415 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 GLS-203ENST00000409215 632 ntTSL 4 BASIC4.13□□□□□ -1.75
USF1P22415 GTF2IP5-201ENST00000414608 731 ntBASIC4.13□□□□□ -1.75
USF1P22415 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 AC013429.2-201ENST00000418798 781 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 AC004074.1-201ENST00000421810 1063 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC016712.1-201ENST00000431088 378 ntBASIC4.13□□□□□ -1.75
USF1P22415 NRBF2P3-201ENST00000432731 865 ntBASIC4.13□□□□□ -1.75
USF1P22415 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 RPL35AP21-201ENST00000437667 333 ntBASIC4.13□□□□□ -1.75
USF1P22415 MTND6P18-201ENST00000439477 513 ntBASIC4.13□□□□□ -1.75
USF1P22415 RPS29P9-201ENST00000440360 171 ntBASIC4.13□□□□□ -1.75
USF1P22415 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 AURKAPS2-201ENST00000454983 333 ntBASIC4.13□□□□□ -1.75
USF1P22415 snoU13.1-201ENST00000459157 104 ntBASIC4.13□□□□□ -1.75
USF1P22415 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 AC092905.1-201ENST00000467527 949 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC005412.2-201ENST00000492004 341 ntBASIC4.13□□□□□ -1.75
USF1P22415 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 PRELID3BP5-201ENST00000508612 460 ntBASIC4.13□□□□□ -1.75
USF1P22415 MTCO3P42-201ENST00000509488 518 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 MTCO3P39-201ENST00000514812 518 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 MORF4L1P3-201ENST00000525966 950 ntBASIC4.13□□□□□ -1.75
USF1P22415 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.13□□□□□ -1.75
USF1P22415 AC209154.1-201ENST00000582156 337 ntBASIC4.13□□□□□ -1.75
USF1P22415 RN7SL435P-201ENST00000584418 282 ntBASIC4.13□□□□□ -1.75
USF1P22415 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 UBA2-208ENST00000592791 910 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 AC133552.5-201ENST00000604266 540 ntBASIC4.13□□□□□ -1.75
USF1P22415 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC4.13□□□□□ -1.75
USF1P22415 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
USF1P22415 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
USF1P22415 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
USF1P22415 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms