Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AL359715.5-201ENST00000623431 443 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 MKKS-204ENST00000639674 192 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.09□□□□□ -1.27
ERCC3P19447 AL606537.1-201ENST00000607258 2011 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 GUCY1B2-204ENST00000531898 1979 ntBASIC7.09□□□□□ -1.27
ERCC3P19447 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
ERCC3P19447 DBF4P1-201ENST00000412976 1892 ntBASIC7.09□□□□□ -1.28
ERCC3P19447 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC7.09□□□□□ -1.28
ERCC3P19447 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.09□□□□□ -1.28
ERCC3P19447 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 MIR323A-201ENST00000362199 86 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 RNU6-621P-201ENST00000364752 109 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 RN7SKP292-201ENST00000365522 317 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 Y_RNA.559-201ENST00000384686 107 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 NUDT19P3-201ENST00000404698 555 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 HYKK-202ENST00000408962 847 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 USP9YP33-201ENST00000412220 421 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 RNGTTP1-201ENST00000420965 728 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 VN1R21P-201ENST00000426703 765 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 USP9YP35-201ENST00000435696 412 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AL591363.1-201ENST00000450091 483 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 OR6C5P-201ENST00000452388 923 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 NDUFA12P1-201ENST00000455914 406 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 RPL7P6-201ENST00000480903 738 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
ERCC3P19447 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 RFPL1S-203ENST00000539579 330 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 HYKK-203ENST00000563233 734 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 MRO-208ENST00000588444 866 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 RSL24D1P11-201ENST00000591045 491 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC073544.2-201ENST00000601155 540 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC068790.6-201ENST00000602558 258 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 XIST-210ENST00000602863 775 ntTSL 3 BASIC7.08□□□□□ -1.28
ERCC3P19447 AL353600.1-201ENST00000608148 251 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 MIR6768-201ENST00000610734 72 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC006924.1-201ENST00000610750 559 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 MIR6809-201ENST00000612189 116 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 AC090582.1-201ENST00000636321 199 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 CDR1-202ENST00000625883 1485 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC7.08□□□□□ -1.28
ERCC3P19447 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.08□□□□□ -1.28
ERCC3P19447 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC7.08□□□□□ -1.28
ERCC3P19447 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.08□□□□□ -1.28
ERCC3P19447 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
ERCC3P19447 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC3P19447 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC7.07□□□□□ -1.28
ERCC3P19447 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 AL512646.1-201ENST00000269395 1077 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 MIR1203-201ENST00000408812 85 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 AL354890.1-201ENST00000413730 346 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 RPS7P8-201ENST00000418311 581 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC7.07□□□□□ -1.28
ERCC3P19447 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC3P19447 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
ERCC3P19447 VN1R110P-201ENST00000438988 971 ntBASIC7.07□□□□□ -1.28
ERCC3P19447 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC7.07□□□□□ -1.28
ERCC3P19447 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC7.07□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms