Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 NCOA2-201ENST00000452400 8447 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 RNA5SP119-201ENST00000362715 117 ntBASIC7.52□□□□□ -1.21
CFTRP13569 GLS-204ENST00000409428 816 ntTSL 2 BASIC7.52□□□□□ -1.21
CFTRP13569 AC115285.1-201ENST00000424879 736 ntBASIC7.52□□□□□ -1.21
CFTRP13569 RPL7P2-201ENST00000427639 268 ntBASIC7.52□□□□□ -1.21
CFTRP13569 UBE2V1P3-201ENST00000439651 417 ntBASIC7.52□□□□□ -1.21
CFTRP13569 AL512326.1-201ENST00000443050 721 ntBASIC7.52□□□□□ -1.21
CFTRP13569 AC010374.1-201ENST00000503762 1237 ntBASIC7.52□□□□□ -1.21
CFTRP13569 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC7.52□□□□□ -1.21
CFTRP13569 AC087477.6-201ENST00000559595 843 ntBASIC7.52□□□□□ -1.21
CFTRP13569 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC7.52□□□□□ -1.21
CFTRP13569 ADAD1P2-201ENST00000588476 646 ntBASIC7.52□□□□□ -1.21
CFTRP13569 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
CFTRP13569 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
CFTRP13569 AC010608.2-201ENST00000624830 470 ntBASIC7.52□□□□□ -1.21
CFTRP13569 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 AC007159.1-201ENST00000566529 4706 ntBASIC7.52□□□□□ -1.21
CFTRP13569 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 AC079777.1-201ENST00000623836 1953 ntBASIC7.52□□□□□ -1.21
CFTRP13569 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
CFTRP13569 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CFTRP13569 RNA5SP372-201ENST00000390836 115 ntBASIC7.51□□□□□ -1.21
CFTRP13569 TPT1P2-201ENST00000413105 503 ntBASIC7.51□□□□□ -1.21
CFTRP13569 TCEA1P4-201ENST00000415066 844 ntBASIC7.51□□□□□ -1.21
CFTRP13569 AL035246.1-201ENST00000433554 1255 ntBASIC7.51□□□□□ -1.21
CFTRP13569 ARL4AP4-201ENST00000434170 518 ntBASIC7.51□□□□□ -1.21
CFTRP13569 TCEA1P3-201ENST00000443005 880 ntBASIC7.51□□□□□ -1.21
CFTRP13569 AL157884.3-201ENST00000448273 1184 ntBASIC7.51□□□□□ -1.21
CFTRP13569 RNA5SP73-201ENST00000516744 108 ntBASIC7.51□□□□□ -1.21
CFTRP13569 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC7.51□□□□□ -1.21
CFTRP13569 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC7.51□□□□□ -1.21
CFTRP13569 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CFTRP13569 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
CFTRP13569 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
CFTRP13569 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
CFTRP13569 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC7.51□□□□□ -1.21
CFTRP13569 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.51□□□□□ -1.21
CFTRP13569 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
CFTRP13569 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
CFTRP13569 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC7.5□□□□□ -1.21
CFTRP13569 RPL6P29-201ENST00000414863 865 ntBASIC7.5□□□□□ -1.21
CFTRP13569 Z74021.1-201ENST00000423610 407 ntBASIC7.5□□□□□ -1.21
CFTRP13569 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC7.5□□□□□ -1.21
CFTRP13569 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 TVP23BP1-201ENST00000557500 617 ntBASIC7.5□□□□□ -1.21
CFTRP13569 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC7.5□□□□□ -1.21
CFTRP13569 CR392039.5-201ENST00000623201 510 ntBASIC7.5□□□□□ -1.21
CFTRP13569 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
CFTRP13569 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CFTRP13569 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.5□□□□□ -1.21
CFTRP13569 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CFTRP13569 AP000357.1-201ENST00000409926 1165 ntBASIC7.49□□□□□ -1.21
CFTRP13569 RNA5SP36-201ENST00000410197 133 ntBASIC7.49□□□□□ -1.21
CFTRP13569 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.49□□□□□ -1.21
CFTRP13569 AC004938.1-201ENST00000438468 308 ntBASIC7.49□□□□□ -1.21
CFTRP13569 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC7.49□□□□□ -1.21
CFTRP13569 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC7.49□□□□□ -1.21
CFTRP13569 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC7.49□□□□□ -1.21
CFTRP13569 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC7.49□□□□□ -1.21
CFTRP13569 SNORA51-201ENST00000606420 132 ntBASIC7.49□□□□□ -1.21
CFTRP13569 AL136164.3-201ENST00000624429 3978 ntBASIC7.49□□□□□ -1.21
CFTRP13569 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC7.49□□□□□ -1.21
CFTRP13569 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 AL603750.1-201ENST00000624216 1717 ntBASIC7.49□□□□□ -1.21
CFTRP13569 AC092162.3-201ENST00000624511 1624 ntBASIC7.49□□□□□ -1.21
CFTRP13569 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CFTRP13569 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC7.49□□□□□ -1.21
CFTRP13569 AL050321.1-201ENST00000432363 400 ntBASIC7.49□□□□□ -1.21
CFTRP13569 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.49□□□□□ -1.21
CFTRP13569 RNA5SP360-201ENST00000516555 118 ntBASIC7.49□□□□□ -1.21
CFTRP13569 AC130352.1-201ENST00000602979 661 ntBASIC7.49□□□□□ -1.21
CFTRP13569 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CFTRP13569 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CFTRP13569 CASC19-206ENST00000641028 1430 ntBASIC7.48□□□□□ -1.21
CFTRP13569 AC092376.2-201ENST00000622621 4116 ntBASIC7.48□□□□□ -1.21
CFTRP13569 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC7.48□□□□□ -1.21
CFTRP13569 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CFTRP13569 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC7.48□□□□□ -1.21
CFTRP13569 SNORA73.2-201ENST00000364946 201 ntBASIC7.48□□□□□ -1.21
CFTRP13569 RNA5SP151-201ENST00000365632 117 ntBASIC7.48□□□□□ -1.21
CFTRP13569 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CFTRP13569 RNU11-4P-201ENST00000391149 133 ntBASIC7.48□□□□□ -1.21
CFTRP13569 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC7.48□□□□□ -1.21
CFTRP13569 YME1L1P1-201ENST00000429435 297 ntBASIC7.48□□□□□ -1.21
CFTRP13569 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC7.48□□□□□ -1.21
CFTRP13569 RN7SL812P-201ENST00000493791 279 ntBASIC7.48□□□□□ -1.21
CFTRP13569 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC7.48□□□□□ -1.21
CFTRP13569 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC7.48□□□□□ -1.21
CFTRP13569 TRMT10BP1-201ENST00000519377 943 ntBASIC7.48□□□□□ -1.21
CFTRP13569 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC7.48□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms