Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC025465.4-201ENST00000513422 638 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 UBE2NP1-201ENST00000545592 458 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 SMARCE1P3-201ENST00000553649 1231 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 NIFKP8-201ENST00000560500 874 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 TPRKBP2-201ENST00000565969 475 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC012414.6-201ENST00000568241 401 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 ISCA1P3-201ENST00000577104 373 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC125494.2-201ENST00000602431 657 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MIR8089-201ENST00000620165 82 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AL356321.1-201ENST00000621360 228 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AF001550.2-201ENST00000636643 217 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 PARP4P2-201ENST00000446672 3326 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 AC100871.1-201ENST00000507871 1456 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 BX322650.1-201ENST00000332359 2143 ntBASIC8.05□□□□□ -1.12
CSB-PGBD3P0DP91 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 RMST-210ENST00000640149 2844 ntTSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC078880.4-201ENST00000617627 1749 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 OR56B2P-201ENST00000317102 954 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 SELENOWP1-201ENST00000322792 252 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 RNA5SP500-201ENST00000364486 119 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 RNU2-41P-201ENST00000410991 178 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 NPM1P4-201ENST00000414095 812 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 TRBV24OR9-2-201ENST00000416632 435 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC010975.2-201ENST00000427781 588 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 ATP5F1P1-201ENST00000433775 569 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC079776.3-201ENST00000450665 370 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 CCDC11P1-201ENST00000503137 1162 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 MTCO2P30-201ENST00000503662 364 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 ATG10-208ENST00000513634 618 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 RNU6-507P-201ENST00000516045 100 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AP003392.2-201ENST00000527269 208 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 RPA2P3-201ENST00000533268 770 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC116553.2-201ENST00000564203 463 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC090616.5-202ENST00000582111 297 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 MIR548Y-201ENST00000582739 110 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AP005137.2-201ENST00000609238 400 ntBASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC8.04□□□□□ -1.12
CSB-PGBD3P0DP91 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 BIN2P1-201ENST00000504996 1530 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 LDB2-216ENST00000515064 2295 ntAPPRIS ALT1 TSL 2 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RNU4-21P-201ENST00000362802 126 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 RNU6-1339P-201ENST00000363574 91 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 SNORA74A-201ENST00000364089 198 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC245054.1-201ENST00000420944 258 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC007435.1-201ENST00000421086 415 ntBASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC8.03□□□□□ -1.12
CSB-PGBD3P0DP91 AC127526.2-201ENST00000426436 775 ntBASIC8.03□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 183.1 ms