Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RNU6-171P-201ENST00000384354 107 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR765-201ENST00000390226 114 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RNA5SP372-201ENST00000390836 115 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR921-201ENST00000401133 56 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 HDGFP1-201ENST00000405943 252 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 CEACAMP8-201ENST00000413902 580 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC093414.1-201ENST00000434712 514 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 HMGB3P10-201ENST00000434734 572 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 PPIAP20-201ENST00000449839 135 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RPS5P7-201ENST00000456664 608 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RPL23AP65-201ENST00000475608 468 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC117394.1-201ENST00000477323 567 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 BX284632.1-201ENST00000478218 541 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 GAPDHP56-201ENST00000506031 988 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RNA5SP392-201ENST00000516905 112 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 IGLV2-28-201ENST00000520681 304 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC133555.2-201ENST00000550213 292 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AL121839.1-201ENST00000556233 1185 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 RN7SL802P-201ENST00000577858 299 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR3691-201ENST00000578066 90 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR4489-201ENST00000578869 62 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR5699-201ENST00000578903 90 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC022726.1-201ENST00000587475 207 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 HMGB2P1-201ENST00000591146 634 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC011487.3-201ENST00000593607 453 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC005520.3-201ENST00000602874 370 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 LDHA-225ENST00000625635 141 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MIR6715B-201ENST00000637172 77 ntBASIC5.11□□□□□ -1.59
CCDC172P0C7W6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.11□□□□□ -1.59
CCDC172P0C7W6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RNU1-108P-201ENST00000362556 161 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 ARL4AP5-201ENST00000404372 599 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 SEPT7P8-201ENST00000413308 775 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC004552.1-201ENST00000419089 348 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 FABP7P1-201ENST00000424004 391 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RPS26P3-201ENST00000470205 348 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RN7SL817P-201ENST00000480777 288 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RN7SL727P-201ENST00000482164 296 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC090543.2-201ENST00000483963 348 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC004057.1-201ENST00000485827 348 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RPL37AP8-201ENST00000494116 276 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC104971.1-201ENST00000495117 578 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 IRF5P1-201ENST00000504852 2164 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 snoU109.6-201ENST00000516831 118 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 RPL21P7-201ENST00000557463 483 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC093249.4-201ENST00000564755 259 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC130352.1-201ENST00000602979 661 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC025946.2-201ENST00000603398 234 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 MIR6826-201ENST00000617808 98 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 AC112694.2-201ENST00000623697 768 ntBASIC5.1□□□□□ -1.59
CCDC172P0C7W6 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC172P0C7W6 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC172P0C7W6 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC172P0C7W6 NCLP2-201ENST00000416078 1462 ntBASIC5.09□□□□□ -1.59
CCDC172P0C7W6 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms