Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC009238.2-201ENST00000431026 355 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL606490.7-201ENST00000433136 191 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 USP9YP28-201ENST00000435142 589 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC073143.1-201ENST00000436316 395 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 MTCYBP29-201ENST00000436327 1006 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC112492.1-201ENST00000449607 712 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 RPL7P55-201ENST00000450522 746 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 IGHV5-78-201ENST00000450948 295 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 BX842559.2-201ENST00000451418 605 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 TPTE2P5-203ENST00000458118 728 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 NAP1L1P3-201ENST00000462291 880 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC113420.1-201ENST00000507903 571 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 MRPS36P3-201ENST00000519284 130 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC069304.3-201ENST00000603938 1084 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL031320.1-201ENST00000604177 357 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 AL049844.2-201ENST00000604280 628 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 MIR6748-201ENST00000610433 71 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 BX649567.1-201ENST00000642071 1134 ntBASIC6.01□□□□□ -1.45
HLA-DOAP06340 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
HLA-DOAP06340 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.01□□□□□ -1.45
HLA-DOAP06340 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6□□□□□ -1.45
HLA-DOAP06340 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
HLA-DOAP06340 RNU5B-4P-201ENST00000363508 111 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 RNA5SP87-201ENST00000384155 118 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 SNORA79B-201ENST00000410557 148 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 LIPT1P1-201ENST00000415870 1186 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AL354868.1-201ENST00000417077 482 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 VN1R42P-201ENST00000424651 344 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 FABP7P2-201ENST00000429946 379 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 RPS6P15-201ENST00000431996 751 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 BX323845.1-201ENST00000432417 179 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 FABP5P3-201ENST00000437960 408 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC6□□□□□ -1.45
HLA-DOAP06340 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 AC092155.2-201ENST00000454675 477 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC091180.1-201ENST00000462104 372 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC008379.1-201ENST00000463655 464 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC007686.1-201ENST00000488511 463 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6□□□□□ -1.45
HLA-DOAP06340 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6□□□□□ -1.45
HLA-DOAP06340 VN1R78P-201ENST00000597393 564 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC021171.1-201ENST00000603137 706 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AL353778.1-201ENST00000603149 408 ntBASIC6□□□□□ -1.45
HLA-DOAP06340 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC6□□□□□ -1.45
HLA-DOAP06340 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC6□□□□□ -1.45
HLA-DOAP06340 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
HLA-DOAP06340 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
HLA-DOAP06340 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6□□□□□ -1.45
HLA-DOAP06340 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
HLA-DOAP06340 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
HLA-DOAP06340 AC007998.4-201ENST00000612496 2533 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms