Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 AC090220.1-201ENST00000593078 1699 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC073136.1-201ENST00000449426 2884 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL2A1P02458 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC5.31□□□□□ -1.56
COL2A1P02458 SLC4A1APP1-201ENST00000419995 602 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 NPM1P26-201ENST00000426339 738 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.31□□□□□ -1.56
COL2A1P02458 AC114495.1-201ENST00000441274 436 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC041039.1-201ENST00000485656 536 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 RPS27AP16-201ENST00000492222 470 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 DSTNP2-201ENST00000504533 515 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.31□□□□□ -1.56
COL2A1P02458 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.31□□□□□ -1.56
COL2A1P02458 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 MIR2116-201ENST00000517221 80 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.31□□□□□ -1.56
COL2A1P02458 AC008833.1-201ENST00000611633 691 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 AC022960.2-201ENST00000616300 666 ntBASIC5.31□□□□□ -1.56
COL2A1P02458 TEX41-256ENST00000626411 368 ntTSL 5 BASIC5.31□□□□□ -1.56
COL2A1P02458 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
COL2A1P02458 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
COL2A1P02458 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL2A1P02458 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL2A1P02458 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
COL2A1P02458 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
COL2A1P02458 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
COL2A1P02458 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.3□□□□□ -1.56
COL2A1P02458 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.3□□□□□ -1.56
COL2A1P02458 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC5.3□□□□□ -1.56
COL2A1P02458 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
COL2A1P02458 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 EI24P3-201ENST00000399046 1062 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.3□□□□□ -1.56
COL2A1P02458 AL139095.3-201ENST00000419672 1203 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 RPL34P6-201ENST00000432390 345 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 GTF3AP5-201ENST00000442645 697 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 UQCRHP4-201ENST00000471686 272 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.3□□□□□ -1.56
COL2A1P02458 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.3□□□□□ -1.56
COL2A1P02458 RNA5SP249-201ENST00000516127 99 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC5.3□□□□□ -1.56
COL2A1P02458 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC5.3□□□□□ -1.56
COL2A1P02458 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC5.3□□□□□ -1.56
COL2A1P02458 PSMB7P1-201ENST00000556349 514 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 AC090515.3-201ENST00000560431 315 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 uc_338.13-201ENST00000618243 179 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 OR2L1P-202ENST00000641567 1023 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
COL2A1P02458 AC107068.1-201ENST00000563286 4218 ntBASIC5.3□□□□□ -1.56
COL2A1P02458 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
COL2A1P02458 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.3□□□□□ -1.56
COL2A1P02458 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
COL2A1P02458 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL2A1P02458 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
COL2A1P02458 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 AP000568.1-201ENST00000282964 442 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 RPL23AP26-201ENST00000412728 464 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC5.29□□□□□ -1.56
COL2A1P02458 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.29□□□□□ -1.56
COL2A1P02458 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC5.29□□□□□ -1.56
COL2A1P02458 RN7SL691P-201ENST00000494487 301 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.29□□□□□ -1.56
COL2A1P02458 MTCO1P49-201ENST00000523429 802 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 AP003730.1-201ENST00000524605 285 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL2A1P02458 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC5.29□□□□□ -1.56
COL2A1P02458 AC022916.3-201ENST00000592961 742 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 AC090948.2-201ENST00000607363 564 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 AC020658.4-201ENST00000613987 684 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
COL2A1P02458 AL023881.1-201ENST00000621088 301 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 AL391262.2-201ENST00000622466 494 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 MIR492-201ENST00000638676 116 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 LINC01808-202ENST00000641680 1116 ntBASIC5.29□□□□□ -1.56
COL2A1P02458 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
COL2A1P02458 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.29□□□□□ -1.56
COL2A1P02458 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
COL2A1P02458 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL2A1P02458 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL2A1P02458 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms