Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
TNFP01375 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
TNFP01375 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 FAM3C2-201ENST00000312214 681 ntBASIC4.43□□□□□ -1.7
TNFP01375 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFP01375 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFP01375 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFP01375 RPS29P17-201ENST00000430795 166 ntBASIC4.43□□□□□ -1.7
TNFP01375 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 FTH1P16-201ENST00000435241 552 ntBASIC4.43□□□□□ -1.7
TNFP01375 CBX1P1-201ENST00000440184 427 ntBASIC4.43□□□□□ -1.7
TNFP01375 FHP1-201ENST00000442741 703 ntBASIC4.43□□□□□ -1.7
TNFP01375 RPL23AP43-201ENST00000446445 471 ntBASIC4.43□□□□□ -1.7
TNFP01375 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.43□□□□□ -1.7
TNFP01375 AC012671.1-201ENST00000451912 203 ntBASIC4.43□□□□□ -1.7
TNFP01375 AC109327.1-201ENST00000471666 403 ntBASIC4.43□□□□□ -1.7
TNFP01375 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.43□□□□□ -1.7
TNFP01375 RN7SKP122-201ENST00000515923 296 ntBASIC4.43□□□□□ -1.7
TNFP01375 RNA5SP464-201ENST00000516251 108 ntBASIC4.43□□□□□ -1.7
TNFP01375 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 AC136624.4-201ENST00000573044 370 ntBASIC4.43□□□□□ -1.7
TNFP01375 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFP01375 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFP01375 AP001160.4-201ENST00000596971 382 ntBASIC4.43□□□□□ -1.7
TNFP01375 AC005520.3-201ENST00000602874 370 ntBASIC4.43□□□□□ -1.7
TNFP01375 AC130352.1-201ENST00000602979 661 ntBASIC4.43□□□□□ -1.7
TNFP01375 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 AC005962.2-201ENST00000611427 652 ntBASIC4.43□□□□□ -1.7
TNFP01375 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFP01375 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.43□□□□□ -1.7
TNFP01375 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.43□□□□□ -1.7
TNFP01375 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC4.43□□□□□ -1.7
TNFP01375 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNFP01375 CPHL1P-201ENST00000461341 3407 ntBASIC4.42□□□□□ -1.7
TNFP01375 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNFP01375 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNFP01375 FABP12P1-201ENST00000401911 322 ntBASIC4.42□□□□□ -1.7
TNFP01375 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFP01375 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 RAD23BP1-201ENST00000421404 1227 ntBASIC4.42□□□□□ -1.7
TNFP01375 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFP01375 VN2R3P-201ENST00000422626 1412 ntBASIC4.42□□□□□ -1.7
TNFP01375 RPL21P43-201ENST00000425440 472 ntBASIC4.42□□□□□ -1.7
TNFP01375 HSPE1P16-201ENST00000426640 348 ntBASIC4.42□□□□□ -1.7
TNFP01375 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFP01375 PHBP16-201ENST00000446318 950 ntBASIC4.42□□□□□ -1.7
TNFP01375 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFP01375 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 PPIAP21-201ENST00000464473 501 ntBASIC4.42□□□□□ -1.7
TNFP01375 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
TNFP01375 RN7SL303P-201ENST00000469773 251 ntBASIC4.42□□□□□ -1.7
TNFP01375 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFP01375 IGBP1P5-201ENST00000507524 1000 ntBASIC4.42□□□□□ -1.7
TNFP01375 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.42□□□□□ -1.7
TNFP01375 AC010476.1-201ENST00000519111 851 ntBASIC4.42□□□□□ -1.7
TNFP01375 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFP01375 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.42□□□□□ -1.7
TNFP01375 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFP01375 AC023575.1-201ENST00000580510 358 ntBASIC4.42□□□□□ -1.7
TNFP01375 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFP01375 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.42□□□□□ -1.7
TNFP01375 AL590392.1-201ENST00000604960 446 ntBASIC4.42□□□□□ -1.7
TNFP01375 AC020634.1-201ENST00000608701 549 ntBASIC4.42□□□□□ -1.7
TNFP01375 AC016717.3-201ENST00000624730 554 ntBASIC4.42□□□□□ -1.7
TNFP01375 AC139713.2-215ENST00000641428 5037 ntBASIC4.42□□□□□ -1.7
TNFP01375 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFP01375 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFP01375 AL731566.1-201ENST00000620490 1937 ntBASIC4.42□□□□□ -1.7
TNFP01375 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.42□□□□□ -1.7
TNFP01375 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 SALL4P2-201ENST00000423288 2910 ntBASIC4.42□□□□□ -1.7
TNFP01375 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
TNFP01375 ICE2P1-201ENST00000512800 1849 ntBASIC4.42□□□□□ -1.7
TNFP01375 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.41□□□□□ -1.7
TNFP01375 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
TNFP01375 LINC00622-201ENST00000562811 1570 ntBASIC4.41□□□□□ -1.7
TNFP01375 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
TNFP01375 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms