Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX2-2O95096 RPL21P67-201ENST00000402896 478 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AL590290.1-201ENST00000405336 380 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AL391361.1-201ENST00000405580 489 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 LIPT1P1-201ENST00000415870 1186 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 USP9YP21-201ENST00000420603 432 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 NPM1P22-201ENST00000427761 952 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 OR52B5P-201ENST00000435337 951 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
NKX2-2O95096 TPT1P1-201ENST00000458495 518 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-2O95096 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC110760.3-202ENST00000515177 371 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.8□□□□□ -1.64
NKX2-2O95096 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC095055.1-201ENST00000603472 1113 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AL512329.2-201ENST00000607350 548 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AC006946.3-201ENST00000609791 756 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 AC108359.1-201ENST00000616451 1211 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 CYCSP41-201ENST00000616920 296 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC015726.3-201ENST00000624501 418 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AL590396.4-201ENST00000636779 956 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 OR52B5P-202ENST00000641118 1110 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
NKX2-2O95096 AC093671.1-201ENST00000624981 2929 ntBASIC4.8□□□□□ -1.64
NKX2-2O95096 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
NKX2-2O95096 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
NKX2-2O95096 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
NKX2-2O95096 PANDAR-201ENST00000629595 1506 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AP000568.1-201ENST00000282964 442 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-2O95096 MIR600-201ENST00000385007 98 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AL603865.2-201ENST00000401679 213 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AL390316.1-201ENST00000406279 553 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 MIR1286-201ENST00000408112 78 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 MTCO2P8-201ENST00000412213 658 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC079355.1-201ENST00000421770 223 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 RRM2P4-201ENST00000441721 562 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AL354710.1-201ENST00000453641 246 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AC021660.1-201ENST00000465006 554 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 COPS8P2-201ENST00000473228 627 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 RPS4XP1-201ENST00000482189 787 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 UBA52P7-201ENST00000486088 380 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 MYL12BP2-201ENST00000503948 512 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 RNU6-347P-201ENST00000516658 105 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 HMGB1P1-201ENST00000522557 636 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC007225.2-201ENST00000562529 256 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 MIR4660-201ENST00000583549 74 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AC018695.5-201ENST00000605872 315 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 AP005432.2-201ENST00000608162 586 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.79□□□□□ -1.64
NKX2-2O95096 AL121890.2-201ENST00000617644 465 ntBASIC4.79□□□□□ -1.64
NKX2-2O95096 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.79□□□□□ -1.64
NKX2-2O95096 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms