Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 NAMPTP2-201ENST00000505629 1115 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC121161.1-201ENST00000510606 652 ntBASIC5.06□□□□□ -1.6
GPC4O75487 RNU6-1004P-201ENST00000516584 111 ntBASIC5.06□□□□□ -1.6
GPC4O75487 SCARNA21.2-201ENST00000516600 166 ntBASIC5.06□□□□□ -1.6
GPC4O75487 SNORA31.13-201ENST00000516624 135 ntBASIC5.06□□□□□ -1.6
GPC4O75487 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.06□□□□□ -1.6
GPC4O75487 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
GPC4O75487 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC4O75487 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC5.06□□□□□ -1.6
GPC4O75487 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 AL049870.4-201ENST00000555741 486 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC122134.1-201ENST00000565664 1104 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC4O75487 MTATP6P2-201ENST00000603319 678 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AL049844.2-201ENST00000604280 628 ntBASIC5.06□□□□□ -1.6
GPC4O75487 BNIP3P31-201ENST00000604515 566 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC024933.1-201ENST00000608472 348 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC108359.1-201ENST00000616451 1211 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AL445528.2-201ENST00000620582 470 ntBASIC5.06□□□□□ -1.6
GPC4O75487 AC145207.9-201ENST00000623802 325 ntBASIC5.06□□□□□ -1.6
GPC4O75487 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
GPC4O75487 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC4O75487 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.06□□□□□ -1.6
GPC4O75487 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
GPC4O75487 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 AL590763.1-201ENST00000398297 1545 ntBASIC5.06□□□□□ -1.6
GPC4O75487 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC5.06□□□□□ -1.6
GPC4O75487 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.06□□□□□ -1.6
GPC4O75487 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 AC007382.1-201ENST00000624376 2618 ntBASIC5.06□□□□□ -1.6
GPC4O75487 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
GPC4O75487 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
GPC4O75487 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 LINC01355-201ENST00000566551 5444 ntBASIC5.05□□□□□ -1.6
GPC4O75487 HMGB1P10-201ENST00000395823 563 ntBASIC5.05□□□□□ -1.6
GPC4O75487 VDAC2P1-201ENST00000399358 958 ntBASIC5.05□□□□□ -1.6
GPC4O75487 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
GPC4O75487 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC4O75487 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 OR51A6P-201ENST00000418680 1004 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 AL139148.1-201ENST00000427122 680 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.05□□□□□ -1.6
GPC4O75487 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
GPC4O75487 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 RPS27P5-201ENST00000444247 244 ntBASIC5.05□□□□□ -1.6
GPC4O75487 MRPL35P2-201ENST00000448009 511 ntBASIC5.05□□□□□ -1.6
GPC4O75487 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 CLIC4P1-201ENST00000453177 535 ntBASIC5.05□□□□□ -1.6
GPC4O75487 RPS20P4-201ENST00000461659 355 ntBASIC5.05□□□□□ -1.6
GPC4O75487 RPL21P6-201ENST00000479171 504 ntBASIC5.05□□□□□ -1.6
GPC4O75487 RN7SL727P-201ENST00000482164 296 ntBASIC5.05□□□□□ -1.6
GPC4O75487 HIGD1AP14-201ENST00000507617 282 ntBASIC5.05□□□□□ -1.6
GPC4O75487 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC4O75487 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.05□□□□□ -1.6
GPC4O75487 RNA5SP34-201ENST00000516887 130 ntBASIC5.05□□□□□ -1.6
GPC4O75487 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 OR11J2P-201ENST00000555298 907 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AC104229.1-201ENST00000561364 255 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 MIR4675-201ENST00000577898 77 ntBASIC5.05□□□□□ -1.6
GPC4O75487 SS18L2P2-201ENST00000583960 235 ntBASIC5.05□□□□□ -1.6
GPC4O75487 BNIP3P39-201ENST00000601077 554 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AC074140.1-201ENST00000621617 208 ntBASIC5.05□□□□□ -1.6
GPC4O75487 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AP000943.4-201ENST00000622912 357 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AC099494.2-201ENST00000623371 978 ntBASIC5.05□□□□□ -1.6
GPC4O75487 AC011815.3-201ENST00000624194 473 ntBASIC5.05□□□□□ -1.6
GPC4O75487 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.05□□□□□ -1.6
GPC4O75487 AC073869.10-201ENST00000642016 354 ntBASIC5.05□□□□□ -1.6
GPC4O75487 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
GPC4O75487 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 HSPA8P18-201ENST00000439846 1928 ntBASIC5.05□□□□□ -1.6
GPC4O75487 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
GPC4O75487 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
GPC4O75487 AC083899.2-201ENST00000423285 1376 ntBASIC5.04□□□□□ -1.6
GPC4O75487 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
GPC4O75487 AC139713.2-215ENST00000641428 5037 ntBASIC5.04□□□□□ -1.6
GPC4O75487 CR788268.1-201ENST00000603931 1809 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms