Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 OR4A46P-201ENST00000527255 933 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
SHOX2O60902 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 AP000919.1-201ENST00000582850 985 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 MIR6820-201ENST00000611508 62 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 AC004477.3-201ENST00000614061 590 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 AC091905.2-201ENST00000623143 306 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.65□□□□□ -1.67
SHOX2O60902 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.65□□□□□ -1.67
SHOX2O60902 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHOX2O60902 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
SHOX2O60902 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
SHOX2O60902 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
SHOX2O60902 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
SHOX2O60902 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHOX2O60902 ZFRP1-201ENST00000457579 2970 ntBASIC4.65□□□□□ -1.67
SHOX2O60902 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.65□□□□□ -1.67
SHOX2O60902 MTND5P23-201ENST00000430812 1655 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHOX2O60902 ZNF603P-201ENST00000405613 487 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 RPL23AP48-201ENST00000406913 488 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 SNORA11C-201ENST00000408532 129 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 RN7SKP59-201ENST00000410520 314 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 RAC1P3-201ENST00000416129 580 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 PTP4A1P1-201ENST00000420539 515 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.64□□□□□ -1.67
SHOX2O60902 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.64□□□□□ -1.67
SHOX2O60902 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 AL133477.1-201ENST00000457472 514 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.64□□□□□ -1.67
SHOX2O60902 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.64□□□□□ -1.67
SHOX2O60902 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 AL589674.2-201ENST00000604304 337 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 HMGB1P50-201ENST00000605814 607 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 MIR432-201ENST00000606207 94 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 MIR7155-201ENST00000615925 56 ntBASIC4.64□□□□□ -1.67
SHOX2O60902 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHOX2O60902 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.64□□□□□ -1.67
SHOX2O60902 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
SHOX2O60902 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHOX2O60902 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
SHOX2O60902 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.63□□□□□ -1.67
SHOX2O60902 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHOX2O60902 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
SHOX2O60902 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.63□□□□□ -1.67
SHOX2O60902 MAPK10-263ENST00000641052 4307 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHOX2O60902 AL513325.1-201ENST00000417716 1034 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.63□□□□□ -1.67
SHOX2O60902 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.63□□□□□ -1.67
SHOX2O60902 RPL7P4-203ENST00000430239 730 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.63□□□□□ -1.67
SHOX2O60902 SNRPFP2-201ENST00000440710 251 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.63□□□□□ -1.67
SHOX2O60902 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.63□□□□□ -1.67
SHOX2O60902 RPL23AP71-201ENST00000470966 469 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 RN7SL826P-201ENST00000479724 288 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC116562.1-201ENST00000485355 781 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC025164.1-201ENST00000496249 478 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC4.63□□□□□ -1.67
SHOX2O60902 RFPL4AP3-201ENST00000515267 345 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AP006289.1-201ENST00000538089 277 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 NMNAT1P1-201ENST00000554095 876 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.63□□□□□ -1.67
SHOX2O60902 AC090181.2-201ENST00000602975 672 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AP000864.1-201ENST00000609424 650 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 AC245389.2-201ENST00000616023 576 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC242843.1-201ENST00000618702 573 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC103858.2-201ENST00000621471 543 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AC006840.1-201ENST00000623069 542 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.63□□□□□ -1.67
SHOX2O60902 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.63□□□□□ -1.67
SHOX2O60902 AL627171.1-201ENST00000618845 1308 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 AL031985.3-201ENST00000565390 2449 ntBASIC4.63□□□□□ -1.67
SHOX2O60902 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
SHOX2O60902 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
SHOX2O60902 AC027287.1-201ENST00000553115 1453 ntBASIC4.62□□□□□ -1.67
SHOX2O60902 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms