Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 AP000936.3-201ENST00000438127 255 ntBASIC4.71□□□□□ -1.66
SNX3O60493 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX3O60493 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 AC011753.3-201ENST00000443436 406 ntBASIC4.71□□□□□ -1.66
SNX3O60493 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 RPL7P45-201ENST00000455851 743 ntBASIC4.71□□□□□ -1.66
SNX3O60493 RPL5P30-201ENST00000465511 891 ntBASIC4.71□□□□□ -1.66
SNX3O60493 RPS21P4-201ENST00000487122 248 ntBASIC4.71□□□□□ -1.66
SNX3O60493 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SNX3O60493 AC092451.2-201ENST00000538746 658 ntBASIC4.71□□□□□ -1.66
SNX3O60493 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.71□□□□□ -1.66
SNX3O60493 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 AC126177.5-201ENST00000549599 178 ntBASIC4.71□□□□□ -1.66
SNX3O60493 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX3O60493 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 AC025918.2-201ENST00000558683 763 ntBASIC4.71□□□□□ -1.66
SNX3O60493 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX3O60493 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 AC008759.1-201ENST00000589783 983 ntBASIC4.71□□□□□ -1.66
SNX3O60493 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.71□□□□□ -1.66
SNX3O60493 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.71□□□□□ -1.66
SNX3O60493 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
SNX3O60493 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
SNX3O60493 SAMMSON-213ENST00000641336 1521 ntBASIC4.71□□□□□ -1.66
SNX3O60493 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.71□□□□□ -1.66
SNX3O60493 ZNF90P1-201ENST00000480493 1951 ntBASIC4.71□□□□□ -1.66
SNX3O60493 TLK1P1-201ENST00000456760 2440 ntBASIC4.71□□□□□ -1.66
SNX3O60493 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
SNX3O60493 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.7□□□□□ -1.66
SNX3O60493 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.7□□□□□ -1.66
SNX3O60493 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX3O60493 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SNX3O60493 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX3O60493 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX3O60493 MIR93-201ENST00000385024 80 ntBASIC4.7□□□□□ -1.66
SNX3O60493 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX3O60493 RNU1-77P-201ENST00000390868 162 ntBASIC4.7□□□□□ -1.66
SNX3O60493 OR51A6P-201ENST00000418680 1004 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AL133325.1-201ENST00000421090 382 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 SKP1P3-201ENST00000429280 487 ntBASIC4.7□□□□□ -1.66
SNX3O60493 RPL7P33-201ENST00000444159 742 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AC104339.1-201ENST00000465478 348 ntBASIC4.7□□□□□ -1.66
SNX3O60493 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.7□□□□□ -1.66
SNX3O60493 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 AC006499.4-201ENST00000510947 694 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AC008694.2-201ENST00000517591 306 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 NPM1P35-201ENST00000533043 868 ntBASIC4.7□□□□□ -1.66
SNX3O60493 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 AC010547.6-201ENST00000571789 193 ntBASIC4.7□□□□□ -1.66
SNX3O60493 MIR4505-201ENST00000582238 73 ntBASIC4.7□□□□□ -1.66
SNX3O60493 EIF1P5-201ENST00000585002 234 ntBASIC4.7□□□□□ -1.66
SNX3O60493 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX3O60493 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 SUMO2P14-201ENST00000604488 293 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AC025175.1-201ENST00000606482 759 ntBASIC4.7□□□□□ -1.66
SNX3O60493 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 AL158196.1-201ENST00000616786 434 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.7□□□□□ -1.66
SNX3O60493 AC090527.3-201ENST00000619041 548 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AL022401.1-201ENST00000619498 108 ntBASIC4.7□□□□□ -1.66
SNX3O60493 AC019206.1-201ENST00000621938 425 ntBASIC4.7□□□□□ -1.66
SNX3O60493 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.7□□□□□ -1.66
SNX3O60493 AC119674.1-212ENST00000641155 993 ntBASIC4.7□□□□□ -1.66
SNX3O60493 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
SNX3O60493 AL606537.1-201ENST00000607258 2011 ntBASIC4.7□□□□□ -1.66
SNX3O60493 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SNX3O60493 SMG1P6-201ENST00000532337 2930 ntBASIC4.69□□□□□ -1.66
SNX3O60493 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 AC105074.1-201ENST00000623380 3095 ntBASIC4.69□□□□□ -1.66
SNX3O60493 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 MTND4P26-201ENST00000415971 1359 ntBASIC4.69□□□□□ -1.66
SNX3O60493 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SNX3O60493 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 RNU4-74P-201ENST00000411280 161 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.69□□□□□ -1.66
SNX3O60493 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.69□□□□□ -1.66
SNX3O60493 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 AC069154.1-201ENST00000432914 542 ntBASIC4.69□□□□□ -1.66
SNX3O60493 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC4.69□□□□□ -1.66
SNX3O60493 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC4.69□□□□□ -1.66
SNX3O60493 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms