Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 OR4A41P-201ENST00000533053 928 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR4664-201ENST00000583819 71 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 MIR212-201ENST00000586026 110 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC011500.1-201ENST00000601963 469 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC007687.1-201ENST00000602704 304 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC006254.3-201ENST00000603353 884 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 Z93930.3-201ENST00000607919 749 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC009318.3-201ENST00000616916 503 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 SMCR2_2.1-201ENST00000619783 161 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC091905.2-201ENST00000623143 306 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 AC006453.5-201ENST00000636451 619 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 SYT14P1-202ENST00000600441 1448 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 PANDAR-201ENST00000629595 1506 ntBASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC2.47□□□□□ -2.01
CHKB-CPT1BH3BT56 PWAR6-201ENST00000552334 4618 ntBASIC2.46□□□□□ -2.01
CHKB-CPT1BH3BT56 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC2.46□□□□□ -2.01
CHKB-CPT1BH3BT56 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF542P-204ENST00000482727 1305 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ACTR3BP2-202ENST00000623630 1338 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC114786.1-201ENST00000512892 1415 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RNA5SP428-201ENST00000365129 132 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RNA5SP131-201ENST00000365452 119 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL133388.1-201ENST00000404509 287 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LSM5-203ENST00000409782 649 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SKP106-201ENST00000410832 272 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 PPP2R2DP1-201ENST00000420526 637 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092832.1-201ENST00000422934 400 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL513164.1-201ENST00000423268 311 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 USP12PY-201ENST00000427677 1064 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 OR2B7P-201ENST00000429302 934 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC092013.1-201ENST00000438795 332 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL450023.3-201ENST00000440592 271 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL445991.1-201ENST00000450381 475 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC009244.1-201ENST00000450566 258 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 TVP23BP2-201ENST00000455082 615 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ACA64.1-201ENST00000459171 127 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 TFP1-201ENST00000460564 572 ntTSL 4 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SL83P-201ENST00000468131 297 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RN7SL51P-201ENST00000468230 285 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ADAMTS9-AS2-204ENST00000485174 573 ntTSL 4 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 TMEM196-205ENST00000493519 687 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 OR2A3P-201ENST00000493774 953 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC01262-201ENST00000513681 879 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC010342.1-201ENST00000514047 877 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 RNU6-615P-201ENST00000516065 106 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 SNORA70.20-201ENST00000516848 126 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 IGKV1D-32-201ENST00000517449 318 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 IGHVIII-38-1-201ENST00000521454 282 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MRPS16P1-201ENST00000523462 412 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 HIGD1AP10-201ENST00000527837 282 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC078878.1-201ENST00000539832 958 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 AL512430.4-201ENST00000603085 613 ntBASIC2.46□□□□□ -2.02
CHKB-CPT1BH3BT56 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC2.46□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms