Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.73□□□□□ -1.65
TRABD2BA6NFA1 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
TRABD2BA6NFA1 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC4.73□□□□□ -1.65
TRABD2BA6NFA1 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 MUC2-202ENST00000613187 4845 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 RN7SKP153-201ENST00000365026 316 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 MIR129-1-201ENST00000384972 72 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 NPM1P10-201ENST00000398310 865 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 GAPDHP49-201ENST00000421421 961 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC124944.2-201ENST00000429866 1242 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 GTF3AP5-201ENST00000442645 697 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 Z95152.1-201ENST00000453556 656 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 RPL7P41-201ENST00000485823 957 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 OR5M2P-201ENST00000529003 936 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AL049874.4-201ENST00000557593 255 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC023575.1-201ENST00000580510 358 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 RPL12P25-202ENST00000598100 674 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 BX322635.1-201ENST00000605804 496 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AC100814.1-201ENST00000606963 623 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 MIR92B-201ENST00000607575 96 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AP005432.2-201ENST00000608162 586 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AL118556.2-201ENST00000614375 824 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 STX3-208ENST00000641815 3236 ntBASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
TRABD2BA6NFA1 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRABD2BA6NFA1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
TRABD2BA6NFA1 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 SNORD113.2-201ENST00000364166 89 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 SNORA37-201ENST00000384504 129 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC098592.2-201ENST00000413158 265 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AL358176.3-201ENST00000420757 454 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 RPL12P34-201ENST00000424532 479 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 MTCO1P51-201ENST00000427672 1060 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 MTND6P5-201ENST00000448266 512 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 RPS6P2-201ENST00000454208 705 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 RPL23AP56-201ENST00000460778 453 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC138701.1-201ENST00000524329 714 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC009268.1-201ENST00000561352 1203 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 CCDC58P3-201ENST00000590792 430 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 AC011626.1-201ENST00000604710 562 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 MIR6839-201ENST00000620425 113 ntBASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
TRABD2BA6NFA1 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 AC104118.1-201ENST00000607625 1589 ntBASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 CASC19-204ENST00000641001 2055 ntBASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
TRABD2BA6NFA1 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms