Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 RN7SL727P-201ENST00000482164 296 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC079203.1-201ENST00000487972 404 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 RPS27AP16-201ENST00000492222 470 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 SNRPCP2-201ENST00000504370 475 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC138409.2-202ENST00000507274 458 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 RN7SKP141-201ENST00000516167 338 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC087360.1-201ENST00000518788 616 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 RPL23AP53-201ENST00000521854 457 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC012339.2-201ENST00000523996 453 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 ZNF321P-202ENST00000550843 495 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 NDUFB4P11-201ENST00000560510 395 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC011447.4-201ENST00000587562 111 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC010503.3-201ENST00000594355 540 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC024060.1-201ENST00000607052 494 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC105105.5-201ENST00000622635 1294 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC099494.2-201ENST00000623371 978 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC004943.3-201ENST00000624116 600 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AL512506.2-201ENST00000624472 458 ntBASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
TCRBV5S1A1TA0A578 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC011447.7-201ENST00000624228 1590 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RNU6-236P-201ENST00000363886 106 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RN7SKP113-201ENST00000363891 295 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RNU4-22P-201ENST00000411058 166 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RN7SKP126-201ENST00000411143 300 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RHOT1P3-201ENST00000436571 331 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RPL35AP21-201ENST00000437667 333 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AL138787.1-202ENST00000437804 898 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC069540.1-201ENST00000446320 988 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RSL24D1P3-201ENST00000449255 495 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 HMGB1P4-201ENST00000455362 567 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC010486.3-201ENST00000511602 785 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC023050.2-201ENST00000544968 387 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 LSM3P2-201ENST00000551246 273 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC007225.2-201ENST00000562529 256 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 MIR4789-201ENST00000577469 82 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC061975.8-201ENST00000587058 721 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 ZNF92P3-201ENST00000596594 954 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC091057.2-201ENST00000602594 792 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC025175.1-201ENST00000606482 759 ntBASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
TCRBV5S1A1TA0A578 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AP000641.1-201ENST00000531988 1639 ntBASIC5.3□□□□□ -1.56
TCRBV5S1A1TA0A578 AC007342.7-201ENST00000624610 2337 ntBASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 207.8 ms