Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 BPIFA4P-203ENST00000603168 689 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AC023762.1-201ENST00000603280 584 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 LSM1P2-201ENST00000604911 322 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 COX6CP4-201ENST00000605798 228 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 AC000374.1-201ENST00000434698 1745 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 SALL4P2-201ENST00000423288 2910 ntBASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.85□□□□□ -1.63
SMIM28A0A1B0GU29 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC093909.5-201ENST00000621839 1799 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AL929601.4-201ENST00000613011 1341 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 UBBP2-201ENST00000376781 231 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 SNRPFP1-201ENST00000414761 252 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 ELOCP3-201ENST00000439303 348 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 CBX1P1-201ENST00000440184 427 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 KCTD9P6-201ENST00000522306 950 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC002069.2-201ENST00000603580 883 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC005962.2-201ENST00000611427 652 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 MLECP1-201ENST00000615893 709 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 MIR8069-1-201ENST00000616627 86 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 MIR6891-201ENST00000618788 93 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 MIR8069-2-201ENST00000621412 86 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 AC006065.6-201ENST00000625201 545 ntBASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.84□□□□□ -1.63
SMIM28A0A1B0GU29 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.84□□□□□ -1.64
SMIM28A0A1B0GU29 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC4.84□□□□□ -1.64
SMIM28A0A1B0GU29 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC4.84□□□□□ -1.64
SMIM28A0A1B0GU29 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.84□□□□□ -1.64
SMIM28A0A1B0GU29 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AL603750.1-201ENST00000624216 1717 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 MTCO1P7-201ENST00000419523 1542 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC011503.2-201ENST00000594230 1500 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 CTSL3P-202ENST00000412179 788 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AL139095.3-201ENST00000419672 1203 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 REREP1Y-201ENST00000422655 198 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 TRGV7-201ENST00000427089 353 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 REREP2Y-201ENST00000439103 200 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 RPL10P17-201ENST00000453852 316 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 DHFRP3-201ENST00000455595 559 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC083829.1-201ENST00000503756 657 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AP002981.1-201ENST00000517692 975 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AC010547.7-201ENST00000570323 333 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 MIR6830-201ENST00000636015 70 ntBASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
SMIM28A0A1B0GU29 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms