Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC017104.4-201ENST00000636283 1592 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AP000756.2-201ENST00000624168 2567 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 SNORA66-201ENST00000384792 133 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 RNA5SP372-201ENST00000390836 115 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 RNA5SP339-201ENST00000390987 122 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ATP5HP3-201ENST00000396994 486 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 GABARAPL3-201ENST00000412799 354 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 EI24P4-201ENST00000423683 1078 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AL390119.1-201ENST00000440329 312 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 MTCYBP12-201ENST00000440559 1134 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 DEFB109F-201ENST00000491870 277 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC074087.1-201ENST00000512059 724 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC067805.1-201ENST00000559344 470 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ELOCP28-201ENST00000590044 317 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 FO393422.1-201ENST00000603908 708 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 MIR8080-201ENST00000622224 89 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC004232.3-201ENST00000622977 525 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AL691477.1-201ENST00000624398 162 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 CYP4F35P-202ENST00000636121 390 ntBASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.06□□□□□ -1.76
KCNIP3Q9Y2W7 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 PHKBP1-201ENST00000450951 1951 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 ASNSP1-201ENST00000518311 1939 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 EOGT-210ENST00000615922 1931 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC235565.1-201ENST00000456962 1325 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AL080315.1-201ENST00000406055 466 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AL451139.1-201ENST00000434718 346 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC104306.1-201ENST00000449702 371 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RANP1-206ENST00000455094 651 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 HMGB1P47-201ENST00000511281 589 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC108120.2-201ENST00000512973 294 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-760P-201ENST00000516078 97 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-347P-201ENST00000516658 105 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RNU6-1308P-201ENST00000516817 103 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 BUD31P1-201ENST00000521828 359 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 CYCSP28-201ENST00000534284 321 ntBASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.05□□□□□ -1.76
KCNIP3Q9Y2W7 AC069307.1-201ENST00000602820 447 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms