Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC012557.1-201ENST00000607115 611 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 AC234782.5-201ENST00000617723 324 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 MAPK10-349ENST00000641767 3661 ntBASIC4.38□□□□□ -1.71
CCDC88CQ9P219 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
CCDC88CQ9P219 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 MIR659-201ENST00000384963 97 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 GNG5P5-201ENST00000420444 220 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 NMNAT1P2-201ENST00000435192 860 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AC108463.1-201ENST00000450258 347 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 RPL23AP65-201ENST00000475608 468 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 NIP7P2-201ENST00000485801 544 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AC091868.1-201ENST00000508746 304 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 FTH1P11-201ENST00000517577 551 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 BUD31P1-201ENST00000521828 359 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 C1GALT1P3-201ENST00000522049 819 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 COX6CP4-201ENST00000605798 228 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 AC073869.7-201ENST00000640874 297 ntBASIC4.37□□□□□ -1.71
CCDC88CQ9P219 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CCDC88CQ9P219 RNA5SP447-201ENST00000363749 119 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 RNU1-13P-201ENST00000384499 162 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL031584.1-201ENST00000447169 754 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 RPS4XP12-201ENST00000461747 709 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC083829.1-201ENST00000503756 657 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC093840.1-201ENST00000511599 336 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC034205.1-201ENST00000520621 638 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC018523.2-201ENST00000555531 1221 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC019193.2-201ENST00000610012 634 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL138820.1-201ENST00000617901 5305 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 RNU1-63P-201ENST00000383902 164 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 SNORD96B-201ENST00000386148 79 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 LINC00993-201ENST00000420453 540 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 MRPL48P1-201ENST00000445390 636 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 SCARNA10-201ENST00000459255 330 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 DEFB109F-201ENST00000491870 277 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AP001781.1-201ENST00000530977 207 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AP000919.1-201ENST00000582850 985 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 AC005261.2-201ENST00000593427 4258 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 CCT8P1-201ENST00000413611 1657 ntBASIC4.36□□□□□ -1.71
CCDC88CQ9P219 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CCDC88CQ9P219 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 NPM1P38-201ENST00000403835 865 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RPS4XP9-201ENST00000405151 780 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RPL18P10-201ENST00000425606 538 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RPL21P133-201ENST00000443666 476 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 CYCSP42-201ENST00000450823 238 ntBASIC4.35□□□□□ -1.71
CCDC88CQ9P219 RN7SL817P-201ENST00000480777 288 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms