Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 RPS27AP15-201ENST00000447672 466 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 TRY2P-201ENST00000448860 689 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 MYO5BP2-201ENST00000449815 1277 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AL935212.3-201ENST00000450729 284 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 ISCUP1-201ENST00000454451 448 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC005532.2-201ENST00000467154 373 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC012158.1-204ENST00000483430 465 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC098799.3-201ENST00000506095 438 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC106872.4-201ENST00000510050 523 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 BTF3P13-201ENST00000513224 490 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC100770.1-201ENST00000532310 322 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC007225.2-201ENST00000562529 256 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC023762.1-201ENST00000603280 584 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AL391358.1-201ENST00000605342 190 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AP002360.3-201ENST00000607673 710 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC022467.1-201ENST00000614738 749 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AC023509.5-201ENST00000617434 807 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 AL590763.1-201ENST00000398297 1545 ntBASIC4.35□□□□□ -1.71
VAPAQ9P0L0 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
VAPAQ9P0L0 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AL133243.3-201ENST00000617415 3004 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AL139039.2-201ENST00000407436 479 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 RSU1P3-201ENST00000412878 835 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC079355.1-201ENST00000421770 223 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 EEF1B2P5-201ENST00000444820 548 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 H2AFZP5-201ENST00000446960 382 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC073850.1-201ENST00000449243 255 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC134698.5-201ENST00000519444 336 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 PDCD5P1-201ENST00000543528 309 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC087763.1-201ENST00000603391 286 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 MIR7154-201ENST00000620673 73 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC055839.1-201ENST00000634467 498 ntBASIC4.34□□□□□ -1.71
VAPAQ9P0L0 ZNF93-209ENST00000638737 1020 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.34□□□□□ -1.71
VAPAQ9P0L0 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
VAPAQ9P0L0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
VAPAQ9P0L0 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC091046.3-201ENST00000631455 1574 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 RNU1-94P-201ENST00000362627 173 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 MIR765-201ENST00000390226 114 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 snoU13.20-201ENST00000459180 104 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 RN7SL727P-201ENST00000482164 296 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 RPL36AP41-201ENST00000493820 306 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC008897.1-201ENST00000494006 347 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.33□□□□□ -1.72
VAPAQ9P0L0 IGLV3-26-201ENST00000520756 302 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 NPM1P6-201ENST00000521088 871 ntBASIC4.33□□□□□ -1.72
VAPAQ9P0L0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms