Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 CYCSP6-201ENST00000434498 302 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 SUMO2P3-201ENST00000438311 288 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 KNOP1P3-201ENST00000446933 426 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 TCEA1P1-201ENST00000449716 880 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 IGHV5-78-201ENST00000450948 295 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 OR2AF1P-201ENST00000454899 889 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 PSMC1P13-201ENST00000458195 985 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC006967.1-201ENST00000467608 589 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC015864.1-201ENST00000496512 544 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 PCNAP1-201ENST00000505363 709 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC006499.4-201ENST00000510947 694 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 OR4A46P-201ENST00000527255 933 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 MTND4LP25-201ENST00000570218 163 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC027455.1-201ENST00000574104 594 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 EIF1P5-201ENST00000585002 234 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC008759.1-201ENST00000589783 983 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 RPL7P50-201ENST00000600588 727 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AL355802.4-201ENST00000607635 548 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AC009704.2-201ENST00000618739 483 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 MTND4P26-201ENST00000415971 1359 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 AL512283.1-201ENST00000606756 1384 ntBASIC4.63□□□□□ -1.67
NDE1Q9NXR1 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
NDE1Q9NXR1 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 RNU1-77P-201ENST00000390868 162 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 TRIM60P17-201ENST00000415181 719 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC013410.2-201ENST00000422627 201 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 RNF19BPX-201ENST00000426224 625 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 DYNLL1P7-201ENST00000429273 258 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 VN1R48P-201ENST00000448149 1036 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 RNA5SP154-201ENST00000516193 111 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC100770.1-201ENST00000532310 322 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC126177.5-201ENST00000549599 178 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 FO393422.1-201ENST00000603908 708 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC005377.1-201ENST00000605126 456 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AC144521.1-201ENST00000607148 956 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 AL691477.1-201ENST00000624398 162 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 OR14L1P-202ENST00000641545 3009 ntBASIC4.62□□□□□ -1.67
NDE1Q9NXR1 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
NDE1Q9NXR1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 SMG1P6-201ENST00000532337 2930 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 RNU6-40P-201ENST00000384254 107 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 RNU6-729P-201ENST00000384399 107 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 RN7SKP216-201ENST00000411050 312 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 DDX39BP1-205ENST00000422507 192 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 MTCO1P45-201ENST00000431457 267 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 CYCSP12-201ENST00000437729 300 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 PRPF38AP2-201ENST00000438179 851 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC4.61□□□□□ -1.67
NDE1Q9NXR1 MTND2P30-201ENST00000456663 382 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC105918.1-201ENST00000474399 838 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC022336.1-201ENST00000475510 337 ntBASIC4.61□□□□□ -1.67
NDE1Q9NXR1 AC090543.1-201ENST00000492168 485 ntBASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms