Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 MIR8069-1-201ENST00000616627 86 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AL121890.2-201ENST00000617644 465 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AC022106.2-201ENST00000620114 757 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 MIR8069-2-201ENST00000621412 86 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AC019080.5-201ENST00000624891 757 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 TMEM30CP-203ENST00000637814 1035 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 ZNF652P1-201ENST00000442420 1309 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AC109780.1-201ENST00000451768 1344 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AC009643.2-201ENST00000603543 1448 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 TCP1P3-201ENST00000414406 1498 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 DHX9P1-201ENST00000436565 3076 ntBASIC5.12□□□□□ -1.59
PCDH9Q9HC56 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.12□□□□□ -1.59
PCDH9Q9HC56 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC093775.1-201ENST00000624154 1868 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC010132.2-201ENST00000295493 1043 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 SNORA70.10-201ENST00000384515 134 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 VDAC2P1-201ENST00000399358 958 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 GSTA12P-201ENST00000402398 508 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 Z68694.1-201ENST00000413929 841 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL627308.1-201ENST00000435693 821 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 IGHV5-78-201ENST00000450948 295 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 RBMY2TP-201ENST00000451162 947 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 TVP23BP2-201ENST00000455082 615 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC109462.1-201ENST00000491087 368 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 RN7SKP66-201ENST00000516681 231 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 SCARNA1-201ENST00000517138 166 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 MIR4760-201ENST00000585040 80 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC124856.1-201ENST00000600819 896 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC015849.2-201ENST00000605738 409 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AC067838.1-201ENST00000606064 577 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AL445528.2-201ENST00000620582 470 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 AP001005.3-201ENST00000622049 129 ntBASIC5.11□□□□□ -1.59
PCDH9Q9HC56 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 ASAH1-263ENST00000637872 886 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.11□□□□□ -1.59
PCDH9Q9HC56 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 RNA5SP507-201ENST00000363603 121 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SNORA66-201ENST00000384792 133 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SNORD65-201ENST00000391079 73 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 RN7SKP213-201ENST00000410746 298 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 DPPA2P3-201ENST00000411853 655 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
PCDH9Q9HC56 AL512661.1-201ENST00000434586 1253 ntBASIC5.1□□□□□ -1.59
PCDH9Q9HC56 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms