Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AC097523.2-201ENST00000435551 652 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC108463.1-201ENST00000450258 347 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RPS5P7-201ENST00000456664 608 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RPL23AP72-201ENST00000492447 435 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RFPL4AP5-201ENST00000514977 504 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 BGLT3-201ENST00000564523 994 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 MIR5096-201ENST00000583713 70 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 RPL26P30-202ENST00000602923 645 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 CDY3P-201ENST00000454543 1618 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AL355852.1-201ENST00000454081 1771 ntBASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
UPF3BQ9BZI7 AC007382.1-201ENST00000624376 2618 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 MTCO1P46-201ENST00000451639 1491 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 RNA5SP505-201ENST00000364748 108 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC068538.1-201ENST00000376856 336 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AL591848.1-201ENST00000413092 322 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 RPL18P10-201ENST00000425606 538 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC007559.1-201ENST00000428736 355 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AL591623.2-201ENST00000449978 222 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC063943.1-201ENST00000465434 453 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AL161747.1-201ENST00000480068 358 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AL139041.1-201ENST00000605480 610 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 OR7A19P-201ENST00000608051 733 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC097505.1-201ENST00000610199 565 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 AC091046.3-201ENST00000631455 1574 ntBASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.54□□□□□ -1.52
UPF3BQ9BZI7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 OR56B2P-201ENST00000317102 954 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC126755.2-208ENST00000327792 462 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC138969.1-213ENST00000331436 462 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 RPL21P43-201ENST00000425440 472 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 snoU13.1-201ENST00000459157 104 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC090142.1-201ENST00000465776 462 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC026979.1-201ENST00000492525 396 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 UBE2FP2-201ENST00000566646 462 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 MIR4675-201ENST00000577898 77 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 RNU6-84P-201ENST00000607737 102 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 SNORD91B-202ENST00000608459 222 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC011815.3-201ENST00000624194 473 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 MFSD8-220ENST00000641243 1422 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC021242.1-201ENST00000507315 2035 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 AC139713.2-215ENST00000641428 5037 ntBASIC5.53□□□□□ -1.52
UPF3BQ9BZI7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 GLULP6-201ENST00000399502 913 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 OR1H1P-201ENST00000448731 937 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 RBMY2TP-201ENST00000451162 947 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 AP000942.1-201ENST00000463969 747 ntBASIC5.52□□□□□ -1.53
UPF3BQ9BZI7 NPM1P29-201ENST00000483112 803 ntBASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms