Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SCAPERQ9BY12 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 AP000580.1-201ENST00000404439 358 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 AL117339.2-201ENST00000430475 180 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 CYCSP24-201ENST00000445119 316 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 AC093166.2-201ENST00000455969 1017 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 AC009852.2-201ENST00000567898 485 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 MIR8059-201ENST00000620427 81 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 CPHL1P-201ENST00000461341 3407 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 AC004656.1-201ENST00000568479 4951 ntBASIC6.85□□□□□ -1.31
SCAPERQ9BY12 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
SCAPERQ9BY12 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 U3.35-201ENST00000408405 208 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 RPL21P89-201ENST00000444021 467 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC006326.1-201ENST00000445465 787 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 ISCUP1-201ENST00000454451 448 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC005868.1-201ENST00000536421 331 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC003985.2-201ENST00000562268 1669 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 MIR6891-201ENST00000618788 93 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC138965.3-201ENST00000623875 498 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 AC006065.6-201ENST00000625201 545 ntBASIC6.84□□□□□ -1.31
SCAPERQ9BY12 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SCAPERQ9BY12 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 MIR331-201ENST00000362302 94 ntBASIC6.84□□□□□ -1.32
SCAPERQ9BY12 SNORA71.3-201ENST00000362582 128 ntBASIC6.84□□□□□ -1.32
SCAPERQ9BY12 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 RGS17P1-201ENST00000423358 553 ntBASIC6.84□□□□□ -1.32
SCAPERQ9BY12 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 AL049830.4-201ENST00000555149 351 ntBASIC6.84□□□□□ -1.32
SCAPERQ9BY12 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC6.84□□□□□ -1.32
SCAPERQ9BY12 AC140479.6-201ENST00000633535 357 ntBASIC6.84□□□□□ -1.32
SCAPERQ9BY12 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AL391684.1-202ENST00000641293 1636 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 SNORA11F-201ENST00000408237 128 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 NFYAP1-201ENST00000431953 972 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 BTF3P10-201ENST00000433415 495 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 RPL23AP52-201ENST00000439311 478 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 MORF4L2P1-201ENST00000503761 858 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 MYL12BP2-201ENST00000503948 512 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AP005901.4-201ENST00000577336 569 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 uc_338.13-201ENST00000618243 179 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 MIR6075-201ENST00000620782 95 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 CDRT1-208ENST00000630868 794 ntBASIC6.83□□□□□ -1.32
SCAPERQ9BY12 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
SCAPERQ9BY12 AC133552.1-201ENST00000569988 4007 ntBASIC6.82□□□□□ -1.32
SCAPERQ9BY12 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
SCAPERQ9BY12 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 142.4 ms