Protein–RNA interactions for Protein: Q9BY11

PACSIN1, Protein kinase C and casein kinase substrate in neurons protein 1, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN1Q9BY11 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 NMNAT1P5-201ENST00000559657 841 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC018557.2-201ENST00000565082 536 ntTSL 5 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 MTND4LP24-201ENST00000572277 291 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 RN7SL356P-201ENST00000582228 248 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC009027.1-201ENST00000604510 479 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC024257.5-201ENST00000612739 531 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC008115.3-201ENST00000614874 549 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AL158062.1-201ENST00000619632 745 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC139792.2-201ENST00000624218 587 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 OR13C1P-202ENST00000641378 2919 ntBASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
PACSIN1Q9BY11 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC111188.2-201ENST00000529697 1387 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 GVINP1-202ENST00000531871 7271 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZNF733P-202ENST00000444809 1573 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 SFR1P1-201ENST00000403720 688 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 FCF1P5-201ENST00000406490 482 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 COX5BP7-201ENST00000414780 274 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 RAC1P8-201ENST00000427086 527 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC124944.2-201ENST00000429866 1242 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 UBE2V1P1-201ENST00000430836 445 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 GSTM5P1-201ENST00000434751 660 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 HMGN1P2-201ENST00000445197 310 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC092685.1-201ENST00000447960 1243 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AL035407.2-201ENST00000454090 378 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC245028.2-201ENST00000458673 253 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 RNU7-140P-201ENST00000459546 60 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC010468.1-201ENST00000461022 817 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AP000797.2-201ENST00000475768 606 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 NIFKP7-201ENST00000503365 834 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 SNORA70.11-201ENST00000515987 138 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 SNORA70.13-201ENST00000516116 138 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC109635.6-201ENST00000525487 1113 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AL356057.1-201ENST00000533798 831 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC125611.1-201ENST00000549563 229 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 SNORD39.2-201ENST00000579995 76 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC015726.1-201ENST00000602353 681 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AL445423.1-201ENST00000609941 536 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 TUSC7.1-201ENST00000610969 165 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 MIR3974-201ENST00000637126 96 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 LINC02211-204ENST00000642024 1070 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AL513185.3-201ENST00000433335 1300 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 AC120338.1-201ENST00000625074 1541 ntBASIC5.69□□□□□ -1.5
PACSIN1Q9BY11 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 RNU1-87P-201ENST00000363727 170 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 RNU6-353P-201ENST00000364266 108 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 RNU4-7P-201ENST00000364758 141 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 RNU6-1263P-201ENST00000384601 106 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 HMGN1P20-201ENST00000411849 300 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 VTA1P1-201ENST00000414044 866 ntBASIC5.68□□□□□ -1.5
PACSIN1Q9BY11 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms