Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 AC005191.1-201ENST00000603950 358 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC005084.1-201ENST00000605160 304 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 OR7E91P-202ENST00000642062 1198 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 MTND4P4-201ENST00000439033 1366 ntBASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
TRAIPQ9BWF2 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AL136531.3-201ENST00000624378 3658 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 RNA5SP77-201ENST00000365394 120 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 SSXP10-201ENST00000402595 565 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 RPL5P20-201ENST00000403848 896 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC069218.2-201ENST00000411665 344 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC109780.2-201ENST00000413467 845 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 RPS3AP44-201ENST00000425466 790 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 LARP1BP3-201ENST00000437229 869 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 UBE2V1P3-201ENST00000439651 417 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 EEF1E1P1-201ENST00000446998 430 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 SSXP1-201ENST00000453640 473 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 UBFD1P1-201ENST00000473259 814 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 RPL12P31-201ENST00000478433 450 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 ST13P12-201ENST00000508958 1094 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 HSD3BP3-201ENST00000514706 994 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 NMNAT1P5-201ENST00000559657 841 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC012414.6-201ENST00000568241 401 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 BNIP3P23-201ENST00000599655 511 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 BUB1P1-201ENST00000603541 607 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AL499605.1-201ENST00000604628 403 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 OSTC-205ENST00000613215 876 ntTSL 2 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC015540.1-201ENST00000615828 501 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 AL122023.1-201ENST00000622847 530 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 DOCK9-216ENST00000627024 4096 ntTSL 2 BASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 MTND4P26-201ENST00000415971 1359 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 MTND4P16-201ENST00000466108 1367 ntBASIC7.15□□□□□ -1.26
TRAIPQ9BWF2 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 ANKRD62P1-201ENST00000434304 1623 ntBASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC7.15□□□□□ -1.27
TRAIPQ9BWF2 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 TTC41P-205ENST00000551270 3963 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 FGF7P2-201ENST00000332473 296 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 RNU6-433P-201ENST00000363216 104 ntBASIC7.14□□□□□ -1.27
TRAIPQ9BWF2 TINAG-203ENST00000370869 782 ntTSL 3 BASIC7.14□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms