Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC063976.2-201ENST00000425667 3556 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC007996.1-201ENST00000620414 2821 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 OR13C1P-202ENST00000641378 2919 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 RNU1-146P-201ENST00000364015 165 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RNA5SP223-201ENST00000365174 120 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC3.97□□□□□ -1.77
VGLL1Q99990 BMS1P3-201ENST00000372011 932 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 MIR589-201ENST00000385238 99 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC3.97□□□□□ -1.77
VGLL1Q99990 IL6-203ENST00000401651 539 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 HSPA8P15-201ENST00000401676 786 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 SLC20A1P1-201ENST00000413906 956 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 CDY17P-201ENST00000414121 1282 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 XKRYP4-201ENST00000414395 483 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 BTF3P9-201ENST00000418784 283 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 USP9YP21-201ENST00000420603 432 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 PNRC2P1-201ENST00000423940 420 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 OSTCP5-201ENST00000425293 453 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 DEFB130D-201ENST00000426866 237 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC3.97□□□□□ -1.77
VGLL1Q99990 KCTD9P1-201ENST00000430462 1167 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 TMX2P1-201ENST00000436507 708 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AL353898.1-201ENST00000444055 238 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RPS27P5-201ENST00000444247 244 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL589765.3-201ENST00000446084 462 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC004022.1-201ENST00000447766 1066 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC3.97□□□□□ -1.77
VGLL1Q99990 XKRYP5-201ENST00000449659 483 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RPS6P2-201ENST00000454208 705 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL122001.1-201ENST00000457027 370 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 ARL4AP1-201ENST00000503220 705 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC093752.1-206ENST00000511823 336 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RNU6-311P-201ENST00000516224 102 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 CYCSP22-201ENST00000517555 339 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC3.97□□□□□ -1.77
VGLL1Q99990 MRPS36P3-201ENST00000519284 130 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 OR10V3P-201ENST00000525712 725 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 UBTFL10-201ENST00000528532 562 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC022882.1-201ENST00000532142 501 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AP002373.2-201ENST00000541631 1060 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 NANOGNBP2-201ENST00000544753 553 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL049872.1-201ENST00000556323 322 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC005341.1-201ENST00000571086 708 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 NIFKP6-201ENST00000598115 845 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC233280.2-201ENST00000603917 1070 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL162431.4-201ENST00000604674 411 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC067838.1-201ENST00000606064 577 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AC104985.3-201ENST00000623479 597 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AP003485.2-201ENST00000623636 610 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC3.97□□□□□ -1.77
VGLL1Q99990 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC3.97□□□□□ -1.77
VGLL1Q99990 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 OFD1P9Y-201ENST00000417699 1491 ntBASIC3.97□□□□□ -1.77
VGLL1Q99990 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC3.97□□□□□ -1.77
VGLL1Q99990 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
VGLL1Q99990 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.77
VGLL1Q99990 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
VGLL1Q99990 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VGLL1Q99990 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC3.96□□□□□ -1.78
VGLL1Q99990 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC3.96□□□□□ -1.78
VGLL1Q99990 CD86-204ENST00000469710 1604 ntTSL 2 BASIC3.96□□□□□ -1.78
VGLL1Q99990 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VGLL1Q99990 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
VGLL1Q99990 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC3.96□□□□□ -1.78
VGLL1Q99990 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
VGLL1Q99990 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC3.96□□□□□ -1.78
VGLL1Q99990 MTHFD2P5-201ENST00000320415 844 ntBASIC3.96□□□□□ -1.78
VGLL1Q99990 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
VGLL1Q99990 RNU4-28P-201ENST00000364739 141 ntBASIC3.96□□□□□ -1.78
VGLL1Q99990 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms