Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.46□□□□□ -1.7
COL21A1Q96P44 AL136164.3-201ENST00000624429 3978 ntBASIC4.46□□□□□ -1.7
COL21A1Q96P44 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 SMG1P6-201ENST00000532337 2930 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 RNU1-94P-201ENST00000362627 173 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 GAPDHP15-201ENST00000398586 975 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 RPS24P12-201ENST00000402084 394 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AL080315.1-201ENST00000406055 466 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AL590762.4-201ENST00000425885 253 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AC104837.2-201ENST00000427236 424 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 UBE2V2P1-201ENST00000434717 398 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 TDGF1P1-201ENST00000445734 527 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 RPL7L1P1-201ENST00000448259 785 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 OR1H1P-201ENST00000448731 937 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 RBMY2TP-201ENST00000451162 947 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 RPS3AP53-201ENST00000454716 778 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AL356390.1-201ENST00000455684 397 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 RN7SKP34-201ENST00000516142 244 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 BUD31P1-201ENST00000521828 359 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 OR5D15P-201ENST00000531671 942 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 FKBP1BP1-201ENST00000553366 325 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AL121839.1-201ENST00000556233 1185 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 AL031320.1-201ENST00000604177 357 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 COX6CP4-201ENST00000605798 228 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 AC091979.2-201ENST00000607514 214 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
COL21A1Q96P44 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 TLK1P1-201ENST00000456760 2440 ntBASIC4.45□□□□□ -1.7
COL21A1Q96P44 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.45□□□□□ -1.7
COL21A1Q96P44 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 NCLP2-201ENST00000416078 1462 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 SDAD1P1-202ENST00000524156 2051 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 RNU1-20P-201ENST00000363314 162 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 ARL4AP5-201ENST00000404372 599 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 HDGFP1-201ENST00000405943 252 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 VDAC1P9-201ENST00000412766 841 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 MORF4L1P4-201ENST00000450245 976 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC010733.1-201ENST00000451515 401 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC091685.2-201ENST00000454924 864 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 RPS5P7-201ENST00000456664 608 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC063943.1-201ENST00000465434 453 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AP001960.1-201ENST00000506494 658 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC133555.2-201ENST00000550213 292 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 MIR3667-201ENST00000581025 74 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC022726.1-201ENST00000587475 207 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC011453.2-201ENST00000603737 729 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC026979.4-201ENST00000606555 645 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 SNORA35B-201ENST00000607417 129 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 FAM27B-201ENST00000610601 213 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AC074140.1-201ENST00000621617 208 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COL21A1Q96P44 EOGT-210ENST00000615922 1931 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 AL121950.1-201ENST00000624993 2077 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 RLIMP2-201ENST00000427891 1563 ntBASIC4.44□□□□□ -1.7
COL21A1Q96P44 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
COL21A1Q96P44 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.43□□□□□ -1.7
COL21A1Q96P44 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL21A1Q96P44 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms