Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
RPRD1AQ96P16 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
RPRD1AQ96P16 HSPA8P17-201ENST00000427029 1382 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL136164.3-201ENST00000624429 3978 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL450326.2-201ENST00000421913 1962 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC007382.1-201ENST00000624376 2618 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 OR5M12P-201ENST00000423388 929 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL645608.4-201ENST00000423619 154 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 FABP7P1-201ENST00000424004 391 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 UBE2V2P1-201ENST00000434717 398 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC016831.4-201ENST00000438302 307 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 BTF3P6-201ENST00000448054 499 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC011005.3-201ENST00000491624 395 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC233280.2-201ENST00000603917 1070 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC087283.1-201ENST00000604029 1074 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC098935.2-201ENST00000604222 466 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AL161616.1-201ENST00000611867 286 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC020763.5-201ENST00000623298 430 ntBASIC4.91□□□□□ -1.62
RPRD1AQ96P16 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.91□□□□□ -1.62
RPRD1AQ96P16 DDX18P3-201ENST00000404856 2007 ntBASIC4.9□□□□□ -1.62
RPRD1AQ96P16 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RPRD1AQ96P16 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.62
RPRD1AQ96P16 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
RPRD1AQ96P16 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.62
RPRD1AQ96P16 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
RPRD1AQ96P16 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AL590240.1-201ENST00000334118 313 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 MIR298-201ENST00000401212 88 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 RPL5P19-201ENST00000404228 893 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 E2F6P2-201ENST00000420708 748 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AC090686.1-201ENST00000481577 749 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 ARL4AP1-201ENST00000503220 705 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 RNU2-30P-201ENST00000516209 141 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AC107918.3-201ENST00000533272 382 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 OR7A19P-201ENST00000608051 733 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.9□□□□□ -1.63
RPRD1AQ96P16 LINC01109-201ENST00000603837 3081 ntBASIC4.9□□□□□ -1.63
RPRD1AQ96P16 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC010928.1-201ENST00000592477 1447 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC000374.1-201ENST00000434698 1745 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 OR52B1P-201ENST00000316506 909 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 RNU2-50P-201ENST00000410494 143 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 RPL37P18-201ENST00000411602 243 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AL591848.1-201ENST00000413092 322 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 RCC2P2-201ENST00000422174 918 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC079168.2-201ENST00000453977 416 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AC105918.1-201ENST00000474399 838 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 AF186190.1-201ENST00000517470 480 ntBASIC4.89□□□□□ -1.63
RPRD1AQ96P16 IGKV1-32-201ENST00000519290 311 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms