Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC008814.1-201ENST00000603797 406 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.69□□□□□ -1.66
PTP4A1Q93096 AC010857.1-201ENST00000606398 594 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC4.69□□□□□ -1.66
PTP4A1Q93096 BX005214.3-202ENST00000619809 325 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 AP000648.2-201ENST00000624182 404 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 FRG1DP-201ENST00000635586 771 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTP4A1Q93096 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTP4A1Q93096 AL049737.1-201ENST00000413920 1403 ntBASIC4.69□□□□□ -1.66
PTP4A1Q93096 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PTP4A1Q93096 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PTP4A1Q93096 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PTP4A1Q93096 AC112198.2-201ENST00000426589 6996 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 MIR133B-201ENST00000362210 119 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 RNU1-87P-201ENST00000363727 170 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 CYCSP10-201ENST00000417973 294 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 ELOCP11-201ENST00000436690 332 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 RPL7AP61-201ENST00000443410 636 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 ELOCP16-201ENST00000444494 332 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AL162388.1-201ENST00000450912 352 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC104634.1-201ENST00000452720 462 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 RPL5P30-201ENST00000465511 891 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC100832.1-201ENST00000471945 383 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC108729.2-201ENST00000476543 840 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 EIF1P7-201ENST00000487533 337 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 RN7SKP82-201ENST00000516786 223 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC090751.1-201ENST00000566966 267 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 OR1F2P-201ENST00000570470 933 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC020978.7-201ENST00000575953 1187 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 MIR4458-201ENST00000578872 75 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 SNORD95-201ENST00000579879 68 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 VN2R3P-201ENST00000422626 1412 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC091046.3-201ENST00000631455 1574 ntBASIC4.68□□□□□ -1.66
PTP4A1Q93096 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
PTP4A1Q93096 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
PTP4A1Q93096 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
PTP4A1Q93096 RNU6-252P-201ENST00000363232 107 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL513325.1-201ENST00000417716 1034 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC006455.6-201ENST00000426192 893 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL121776.1-201ENST00000429337 372 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC023141.6-201ENST00000429418 337 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AL161722.2-201ENST00000434731 981 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC012075.1-201ENST00000436549 580 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 RPS11P7-201ENST00000442125 465 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 CYCSP42-201ENST00000450823 238 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 MTND2P30-201ENST00000456663 382 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 RPL30P11-201ENST00000495304 339 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC010468.3-201ENST00000508225 458 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 COL6A4P2-205ENST00000509855 506 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 SNORA76.2-201ENST00000517095 137 ntBASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.67□□□□□ -1.66
PTP4A1Q93096 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms