Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 GDA-209ENST00000545168 5362 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 RPS4XP5-202ENST00000449995 1334 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 RNU4-76P-201ENST00000364509 141 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 RNU6-1011P-201ENST00000384668 107 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 SNORA11C-201ENST00000408532 129 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC068533.2-201ENST00000411872 306 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC092647.1-201ENST00000420654 287 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC009237.2-201ENST00000421358 284 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 MTCO3P1-205ENST00000422088 832 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 Z93242.1-201ENST00000427102 353 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AL512649.1-201ENST00000428997 581 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 UBE2FP3-201ENST00000436366 524 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC079922.1-201ENST00000443291 359 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CYCSP25-201ENST00000525280 316 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 GLYCAM1-201ENST00000546596 285 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC121758.1-202ENST00000556917 658 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC005730.3-201ENST00000583067 366 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC027229.1-201ENST00000583887 253 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 NPIPB1P-202ENST00000588786 828 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AP000907.4-201ENST00000604143 237 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AL121757.2-201ENST00000611223 313 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC104260.1-201ENST00000616660 539 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AP005264.7-201ENST00000625003 745 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
NUP43Q8NFH3 AC096921.2-201ENST00000561507 1916 ntBASIC5.86□□□□□ -1.47
NUP43Q8NFH3 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AL731532.1-201ENST00000623972 4236 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RNU6-181P-201ENST00000363225 107 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RNA5SP88-201ENST00000365560 109 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RNU6-98P-201ENST00000384173 107 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 Y_RNA.450-201ENST00000384198 113 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RNU6-297P-201ENST00000384636 107 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 SMARCE1P6-201ENST00000398372 1216 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RPS21P8-201ENST00000413365 247 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 RPL17P12-201ENST00000413391 526 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AC007562.1-201ENST00000421819 517 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AC012498.1-201ENST00000424037 437 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 DPY19L1P2-201ENST00000426647 915 ntBASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.85□□□□□ -1.47
NUP43Q8NFH3 AL022238.1-201ENST00000442557 355 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms