Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 RNA5SP428-201ENST00000365129 132 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 RNA5SP22-201ENST00000365393 109 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 RANP7-201ENST00000418085 644 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 UBTFL3-201ENST00000418934 1024 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 SKP1P3-201ENST00000429280 487 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL353748.1-201ENST00000440753 474 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 HIGD1AP8-201ENST00000453927 274 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 UBTFL6-201ENST00000477929 1024 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 TRIM36-IT1-201ENST00000503723 881 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AC005084.1-201ENST00000605160 304 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL034374.2-201ENST00000605281 548 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL133406.3-201ENST00000606817 541 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL627230.1-201ENST00000613077 211 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AL591926.8-201ENST00000616876 211 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AC016542.2-201ENST00000624201 619 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 LINC01739-205ENST00000641890 573 ntBASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CCDC112Q8NEF3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RN7SKP115-201ENST00000363177 317 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RNU4-4P-201ENST00000364588 130 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 MIR513A2-201ENST00000385249 127 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RN7SKP167-201ENST00000411047 285 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 GTF2IP5-201ENST00000414608 731 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AL590762.4-201ENST00000425885 253 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RPS27AP15-201ENST00000447672 466 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RN7SL319P-201ENST00000480656 221 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC090013.1-201ENST00000485147 480 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 HMGB3P13-201ENST00000511263 607 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RN7SKP147-201ENST00000517154 244 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RN7SL802P-201ENST00000577858 299 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 MIR4436B2-201ENST00000581415 91 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 MIR4436B1-201ENST00000583272 91 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC239803.2-201ENST00000610161 430 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 MIR6820-201ENST00000611508 62 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC100827.5-201ENST00000615883 426 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 TEX41-254ENST00000626394 423 ntTSL 5 BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AL592182.3-201ENST00000642132 3304 ntBASIC5.09□□□□□ -1.59
CCDC112Q8NEF3 AC016588.2-201ENST00000632484 3021 ntBASIC5.09□□□□□ -1.6
CCDC112Q8NEF3 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
CCDC112Q8NEF3 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC112Q8NEF3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CCDC112Q8NEF3 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.6
CCDC112Q8NEF3 THAP12P4-201ENST00000528321 2266 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC103591.2-201ENST00000265259 766 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 SNURFL-201ENST00000309296 343 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 SNORD74.4-201ENST00000364129 80 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 VN1R8P-201ENST00000407739 893 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AL645608.4-201ENST00000423619 154 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 RBMY2QP-201ENST00000429799 1147 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 SUMO2P1-206ENST00000445436 284 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC091685.2-201ENST00000454924 864 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 RPL35AP28-201ENST00000459730 331 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 RPL23AP56-201ENST00000460778 453 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 AC015795.1-201ENST00000513669 327 ntBASIC5.08□□□□□ -1.6
CCDC112Q8NEF3 RNU1-6P-201ENST00000516290 144 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms