Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL591848.1-201ENST00000413092 322 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL512504.1-201ENST00000415494 778 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL356806.1-201ENST00000422524 916 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 FAM204CP-201ENST00000424489 642 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 MTCO1P45-201ENST00000431457 267 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 FTLP19-201ENST00000433300 394 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC004938.1-201ENST00000438468 308 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 MORF4L1P4-201ENST00000450245 976 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 OR52A4P-202ENST00000481634 799 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 OR10D4P-201ENST00000525892 951 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 OR5M2P-201ENST00000529003 936 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC073137.1-201ENST00000605636 634 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC073111.2-201ENST00000605657 1075 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 CASC19-206ENST00000641028 1430 ntBASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.38□□□□□ -1.71
C9orf40Q8IXQ3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ZFRP1-201ENST00000457579 2970 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 MIR298-201ENST00000401212 88 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ATG4AP1-201ENST00000416893 538 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC019050.1-201ENST00000418508 492 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 PTP4A1P1-201ENST00000420539 515 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 RPL7P57-201ENST00000423238 740 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AL513343.1-201ENST00000451818 792 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ALG13-211ENST00000473389 693 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 RPL12P20-201ENST00000475538 479 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 HMGB3P16-201ENST00000508037 287 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC068790.7-201ENST00000602347 528 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC073091.2-201ENST00000603205 907 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 HMGB1P51-201ENST00000605166 638 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 OR7A19P-201ENST00000608051 733 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC084036.1-201ENST00000609190 508 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC015722.2-201ENST00000622210 551 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC015804.1-201ENST00000622935 435 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 AC073342.3-201ENST00000624211 193 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 SMG1P4-204ENST00000523028 4131 ntBASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.37□□□□□ -1.71
C9orf40Q8IXQ3 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 CYB5AP4-201ENST00000396692 399 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC140479.3-201ENST00000418944 1126 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL359265.2-201ENST00000434367 631 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 ARL5AP3-201ENST00000439327 386 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC073264.2-201ENST00000448886 166 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AC108463.1-201ENST00000450258 347 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 MTND2P3-201ENST00000452458 470 ntBASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.36□□□□□ -1.71
C9orf40Q8IXQ3 AL513533.1-201ENST00000453728 415 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms