Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC139769.1-204ENST00000472297 1931 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 MIR30B-201ENST00000384850 88 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 KCNMB3-205ENST00000485523 7246 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC3.56□□□□□ -1.84
VPS13CQ709C8 PRPF19P1-201ENST00000584766 898 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 EIF4A2P1-201ENST00000587313 1063 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 AC005000.2-201ENST00000605468 310 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
VPS13CQ709C8 LCOR-201ENST00000286067 4542 ntBASIC3.56□□□□□ -1.84
VPS13CQ709C8 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 UTY-215ENST00000618474 6277 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 TMCC1-201ENST00000393238 5992 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 RPS4XP4-201ENST00000443195 763 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC104306.1-201ENST00000449702 371 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 ENSA-211ENST00000503345 793 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 PARP4P3-201ENST00000510265 317 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 OR6C71P-202ENST00000641886 1107 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AL929601.4-201ENST00000613011 1341 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 UG0898H09-202ENST00000623646 7040 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 FREM2-201ENST00000280481 16070 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 MIR490-201ENST00000384865 128 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AP000907.1-201ENST00000428428 510 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC021660.1-201ENST00000465006 554 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 EEF1A1P25-201ENST00000495704 1267 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 RNU6-352P-201ENST00000516908 107 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 MTND1P6-201ENST00000523621 946 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC012314.7-201ENST00000619693 93 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC092451.3-201ENST00000625067 1343 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 TCEA1P4-201ENST00000415066 844 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 NOTCH2P1-201ENST00000443481 624 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 IFITM8P-201ENST00000522529 394 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 AC006065.6-201ENST00000625201 545 ntBASIC3.55□□□□□ -1.84
VPS13CQ709C8 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.55□□□□□ -1.84
VPS13CQ709C8 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
VPS13CQ709C8 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MIR331-201ENST00000362302 94 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AL356968.2-201ENST00000412769 1257 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 KC877982.1-201ENST00000602313 470 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AL592436.1-201ENST00000605135 558 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC099669.2-201ENST00000616549 437 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 ZNF833P-201ENST00000424938 1494 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
VPS13CQ709C8 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 AF213884.1-201ENST00000488102 463 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC098799.3-201ENST00000506095 438 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC105031.1-201ENST00000518550 476 ntBASIC3.54□□□□□ -1.84
VPS13CQ709C8 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC3.54□□□□□ -1.84
VPS13CQ709C8 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms