Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC138832.1-201ENST00000522871 556 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 MTCYBP23-201ENST00000558717 1102 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 NPM1P42-201ENST00000560329 862 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC009094.1-201ENST00000564443 426 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 MIR4801-201ENST00000582704 82 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC009597.2-201ENST00000604659 592 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC015849.6-201ENST00000605454 474 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC107952.2-201ENST00000606048 486 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AP002782.1-201ENST00000623107 614 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 AC092192.1-201ENST00000633154 1018 ntBASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SYCE2Q6PIF2 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL121886.1-201ENST00000358609 435 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 RNU6-792P-201ENST00000363490 107 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 RNU4-28P-201ENST00000364739 141 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 RNU1-136P-201ENST00000384181 164 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 ZNF602P-201ENST00000405929 924 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 SNORA11-201ENST00000408789 128 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL512504.1-201ENST00000415494 778 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 NPM1P25-201ENST00000429734 854 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL136455.1-201ENST00000441083 1240 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL031313.1-201ENST00000448435 256 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC073387.1-201ENST00000453261 709 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 RN7SL459P-201ENST00000481078 302 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 GTF2F2P1-201ENST00000511083 675 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC091163.3-201ENST00000518269 1144 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC010376.1-201ENST00000522101 334 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MIR4433B-201ENST00000581329 102 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 OR7A8P-201ENST00000595427 913 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC234771.5-201ENST00000600161 514 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC067838.1-201ENST00000606064 577 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC006338.2-201ENST00000616864 791 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AL512427.1-201ENST00000618593 349 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 AC123767.1-202ENST00000620407 817 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MIR7641-1-201ENST00000627518 61 ntBASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.51
SYCE2Q6PIF2 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
SYCE2Q6PIF2 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.58□□□□□ -1.52
SYCE2Q6PIF2 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.58□□□□□ -1.52
SYCE2Q6PIF2 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms