Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 MIR1254-2-201ENST00000579553 63 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AC133794.1-201ENST00000602731 914 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AC068620.3-201ENST00000602749 560 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AC008115.3-201ENST00000614874 549 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AP004607.9-201ENST00000618202 316 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AC138965.3-201ENST00000623875 498 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 AL356118.1-201ENST00000635272 1078 ntBASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.51□□□□□ -1.69
PDLIM3Q53GG5 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 MAPK10-304ENST00000641341 3984 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RNA5SP500-201ENST00000364486 119 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RNU6-304P-201ENST00000364855 107 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC019155.1-201ENST00000382242 574 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RNU6-532P-201ENST00000384318 107 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 BX664727.1-201ENST00000416024 466 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC073136.2-201ENST00000417282 849 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 HSPD1P12-201ENST00000429127 1069 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 PPIAP21-201ENST00000464473 501 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC100832.1-201ENST00000471945 383 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 METTL15P1-201ENST00000481421 1045 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RPS4XP1-201ENST00000482189 787 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RN7SL57P-201ENST00000493687 290 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC121161.1-201ENST00000510606 652 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC133963.2-201ENST00000513686 578 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC108471.1-201ENST00000513977 287 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RN7SKP141-201ENST00000516167 338 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC134698.5-201ENST00000519444 336 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 BUD31P1-201ENST00000521828 359 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 MAL2-207ENST00000522828 603 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 CASC19-203ENST00000523510 575 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 TOMM20P2-201ENST00000540082 421 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC068993.1-201ENST00000546724 589 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL049779.2-201ENST00000553847 315 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC018552.3-201ENST00000567416 561 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC006116.7-201ENST00000590141 756 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC018809.2-201ENST00000602436 3823 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AL020997.2-201ENST00000602607 184 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC112503.2-201ENST00000609005 552 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 AC131238.1-201ENST00000617135 328 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RN7SL544P-201ENST00000617232 284 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 RN7SL763P-201ENST00000620922 284 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 MIR8080-201ENST00000622224 89 ntBASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.5□□□□□ -1.69
PDLIM3Q53GG5 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
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