Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC38Q502W7 MIR1271-201ENST00000408537 86 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 MIR1303-201ENST00000408625 86 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC093155.2-201ENST00000420734 937 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AL133173.1-201ENST00000423458 397 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 CDY14P-201ENST00000431260 1014 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 RPS29P14-201ENST00000431518 171 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 YWHAEP5-201ENST00000431545 765 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 RPL19P16-201ENST00000433839 588 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 FMO7P-201ENST00000436045 768 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 OR6D1P-201ENST00000436165 939 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 ELOCP10-201ENST00000440624 327 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 CDY12P-201ENST00000440679 1015 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC073109.1-201ENST00000445066 978 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 CDY13P-201ENST00000445813 1015 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 CDY23P-201ENST00000451661 1014 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 PRPF38AP1-201ENST00000451976 933 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AL161747.1-201ENST00000480068 358 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC016559.2-201ENST00000510759 359 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC010285.3-201ENST00000511668 676 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 OR8G3P-201ENST00000533406 921 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 MTCYBP13-201ENST00000578634 1093 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC008521.2-201ENST00000591021 259 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC096947.1-201ENST00000603233 470 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC069431.2-201ENST00000604149 1099 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 ELOCP34-201ENST00000604436 327 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC026790.2-201ENST00000606282 430 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 AC135068.5-201ENST00000624197 983 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC38Q502W7 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC38Q502W7 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.55□□□□□ -1.52
CCDC38Q502W7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AIG1-208ENST00000494282 3393 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCDC38Q502W7 AL731532.2-201ENST00000623542 1953 ntBASIC5.55□□□□□ -1.52
CCDC38Q502W7 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 RNU5E-10P-201ENST00000363506 118 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 UBBP2-201ENST00000376781 231 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL596448.1-201ENST00000415024 392 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC246680.2-201ENST00000422106 389 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 NDUFAF4P2-201ENST00000445374 520 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL050341.1-201ENST00000447743 313 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC084754.1-201ENST00000463466 464 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC018635.1-201ENST00000468292 1030 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC104109.1-201ENST00000498563 436 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AP006245.2-201ENST00000522004 300 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC027369.5-201ENST00000533838 755 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 IGBP1P1-201ENST00000554337 1009 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 RN7SL435P-201ENST00000584418 282 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.54□□□□□ -1.52
CCDC38Q502W7 PSMA6P4-201ENST00000603247 718 ntBASIC5.54□□□□□ -1.52
CCDC38Q502W7 AC243654.2-201ENST00000612843 443 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 140.5 ms