Protein–RNA interactions for Protein: Q3KNS1

PTCHD3, Patched domain-containing protein 3, humanhuman

Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3Q3KNS1 NDUFB4P8-201ENST00000435351 367 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AL359265.1-201ENST00000440296 795 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC073465.2-201ENST00000440938 498 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 Z99714.1-201ENST00000450463 807 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AL450023.1-201ENST00000450868 751 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC083899.1-201ENST00000454465 3819 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 RANP1-206ENST00000455094 651 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 RNU7-140P-201ENST00000459546 60 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 RPL5P23-201ENST00000496040 868 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC083923.1-201ENST00000523708 376 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 MTCO3P15-201ENST00000526563 574 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC008083.2-201ENST00000546707 476 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC069366.1-201ENST00000583159 838 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC091057.2-201ENST00000602594 792 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC009237.13-201ENST00000603193 276 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC007204.2-201ENST00000615022 616 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC007786.3-201ENST00000615154 596 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AC020633.1-201ENST00000468439 2247 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 CASC19-248ENST00000641674 1356 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 CCT8P1-201ENST00000413611 1657 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 MAPK10-328ENST00000641553 4009 ntBASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PTCHD3Q3KNS1 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AMELX-201ENST00000348912 737 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 RN7SKP145-201ENST00000363291 303 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 SNORA70.6-201ENST00000383934 134 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MIR551A-201ENST00000385042 96 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 U3.23-201ENST00000391132 200 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 ELOCP9-201ENST00000418624 239 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AL355433.1-201ENST00000422804 300 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 CFL1P1-202ENST00000432948 411 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 OR6D1P-201ENST00000436165 939 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MTND2P40-201ENST00000436718 841 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MED28P3-201ENST00000444288 531 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 RN7SL547P-201ENST00000490793 290 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC091860.1-201ENST00000505723 432 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC104108.1-201ENST00000509930 412 ntBASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
PTCHD3Q3KNS1 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms