Protein–RNA interactions for Protein: Q15853

USF2, Upstream stimulatory factor 2, humanhuman

Predicted RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF2Q15853 EIF4EP1-201ENST00000422311 642 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC007064.3-201ENST00000422608 359 ntBASIC4.02□□□□□ -1.77
USF2Q15853 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 AL391987.1-201ENST00000441025 200 ntBASIC4.02□□□□□ -1.77
USF2Q15853 RPS11P7-201ENST00000442125 465 ntBASIC4.02□□□□□ -1.77
USF2Q15853 OR2AF1P-201ENST00000454899 889 ntBASIC4.02□□□□□ -1.77
USF2Q15853 RPL5P13-201ENST00000462840 709 ntBASIC4.02□□□□□ -1.77
USF2Q15853 RN7SL174P-201ENST00000475578 289 ntBASIC4.02□□□□□ -1.77
USF2Q15853 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 AC093270.2-201ENST00000486157 792 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.02□□□□□ -1.77
USF2Q15853 RNA5SP373-201ENST00000517271 95 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 AC022404.1-201ENST00000555320 273 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 MTCO2P22-201ENST00000603246 681 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC025946.2-201ENST00000603398 234 ntBASIC4.02□□□□□ -1.77
USF2Q15853 SUGT1P3-202ENST00000604259 383 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC015813.4-201ENST00000610469 179 ntBASIC4.02□□□□□ -1.77
USF2Q15853 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 AP005212.4-201ENST00000614206 710 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC118658.2-201ENST00000618697 459 ntBASIC4.02□□□□□ -1.77
USF2Q15853 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC4.02□□□□□ -1.77
USF2Q15853 AC116563.2-201ENST00000624751 535 ntBASIC4.02□□□□□ -1.77
USF2Q15853 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.02□□□□□ -1.77
USF2Q15853 AC100871.1-201ENST00000507871 1456 ntBASIC4.02□□□□□ -1.77
USF2Q15853 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.02□□□□□ -1.77
USF2Q15853 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
USF2Q15853 AL133412.1-201ENST00000380194 2992 ntBASIC4.02□□□□□ -1.77
USF2Q15853 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.02□□□□□ -1.77
USF2Q15853 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.01□□□□□ -1.77
USF2Q15853 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 AC092747.4-201ENST00000620519 1861 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USF2Q15853 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USF2Q15853 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 RNU1-149P-201ENST00000390870 161 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 AL645733.1-201ENST00000402250 217 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AL390316.1-201ENST00000406279 553 ntBASIC4.01□□□□□ -1.77
USF2Q15853 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.01□□□□□ -1.77
USF2Q15853 RPA2P2-201ENST00000419698 796 ntBASIC4.01□□□□□ -1.77
USF2Q15853 RPL7P53-201ENST00000421245 739 ntBASIC4.01□□□□□ -1.77
USF2Q15853 CYCSP6-201ENST00000434498 302 ntBASIC4.01□□□□□ -1.77
USF2Q15853 PPIAP13-201ENST00000434706 478 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.01□□□□□ -1.77
USF2Q15853 SNRPGP5-201ENST00000456003 220 ntBASIC4.01□□□□□ -1.77
USF2Q15853 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 AC108751.2-201ENST00000469993 231 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC090686.1-201ENST00000481577 749 ntBASIC4.01□□□□□ -1.77
USF2Q15853 RN7SL547P-201ENST00000490793 290 ntBASIC4.01□□□□□ -1.77
USF2Q15853 RN7SL466P-201ENST00000497546 295 ntBASIC4.01□□□□□ -1.77
USF2Q15853 CDH12P2-201ENST00000504393 298 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.01□□□□□ -1.77
USF2Q15853 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 FTH1P9-201ENST00000513251 355 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 BNIP3P35-201ENST00000604530 490 ntBASIC4.01□□□□□ -1.77
USF2Q15853 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.01□□□□□ -1.77
USF2Q15853 MIR6862-1-201ENST00000613016 70 ntBASIC4.01□□□□□ -1.77
USF2Q15853 MIR6862-2-201ENST00000614755 70 ntBASIC4.01□□□□□ -1.77
USF2Q15853 uc_338.32-201ENST00000615087 172 ntBASIC4.01□□□□□ -1.77
USF2Q15853 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.01□□□□□ -1.77
USF2Q15853 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.01□□□□□ -1.77
USF2Q15853 AC074101.1-201ENST00000637861 241 ntBASIC4.01□□□□□ -1.77
USF2Q15853 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
USF2Q15853 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
USF2Q15853 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.01□□□□□ -1.77
USF2Q15853 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms