Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KCTD9P2-201ENST00000512203 1013 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC093878.1-201ENST00000515630 432 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 Y_RNA.704-201ENST00000516851 102 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 IGKV2D-10-201ENST00000520194 281 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC008429.4-201ENST00000521201 182 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 OR52K3P-201ENST00000531655 943 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 RACGAP1-216ENST00000548961 387 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 DUX4L52-201ENST00000549363 777 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 MIR378C-201ENST00000578683 81 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 AL953862.2-201ENST00000603089 820 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 SUGT1P3-202ENST00000604259 383 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC007363.1-201ENST00000604736 620 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC019193.2-201ENST00000610012 634 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AL352984.2-201ENST00000611153 546 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 AC018926.3-201ENST00000618841 406 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC6.43□□□□□ -1.38
PCDH1Q08174 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 HRG-201ENST00000232003 2015 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 AC022905.1-201ENST00000503430 3048 ntBASIC6.43□□□□□ -1.38
PCDH1Q08174 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.43□□□□□ -1.38
PCDH1Q08174 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
PCDH1Q08174 PDE8B-208ENST00000505283 3474 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 IGKV7-3-201ENST00000357453 298 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 RNA5SP321-201ENST00000362722 111 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 MIR187-201ENST00000385062 109 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 RPL31P1-201ENST00000398116 372 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL590635.1-201ENST00000406314 586 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 RN7SKP108-201ENST00000411367 328 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AL513174.1-201ENST00000423182 629 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AHCYP8-201ENST00000425108 209 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL121759.1-202ENST00000425746 387 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AL356133.1-201ENST00000444762 372 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 GAPDHP17-201ENST00000449858 1001 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL590365.1-201ENST00000450788 243 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 PMCHL2-203ENST00000457791 237 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 RPS29P25-201ENST00000481709 171 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 RPS27P23-201ENST00000487608 251 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC012170.1-201ENST00000495139 359 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC090638.1-201ENST00000498296 909 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC026412.2-201ENST00000512270 1075 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 RNU6-583P-201ENST00000516012 92 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.42□□□□□ -1.38
PCDH1Q08174 FAM92A1P1-201ENST00000528023 890 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC6.42□□□□□ -1.38
PCDH1Q08174 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC6.42□□□□□ -1.38
PCDH1Q08174 OR7E19P-202ENST00000589942 844 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 AC245052.7-201ENST00000601161 359 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC073091.2-201ENST00000603205 907 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL157899.1-201ENST00000604110 936 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.42□□□□□ -1.38
PCDH1Q08174 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 MIR6883-201ENST00000614952 78 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 AC104010.1-201ENST00000616889 150 ntBASIC6.42□□□□□ -1.38
PCDH1Q08174 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PCDH1Q08174 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 124.3 ms