Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 RNA5SP334-201ENST00000364825 118 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 MT-TD-201ENST00000387419 68 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AC245096.1-201ENST00000413104 546 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 PTP4A1P1-201ENST00000420539 515 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AC009237.2-201ENST00000421358 284 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 IGHV1-14-201ENST00000523391 241 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 OR4C2P-201ENST00000530855 1064 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC123904.3-201ENST00000547218 814 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 PCMTD1P2-201ENST00000565017 355 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.61□□□□□ -1.35
SOX4Q06945 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 AC011472.4-201ENST00000615848 491 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AL445670.1-201ENST00000618889 801 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AL158209.2-201ENST00000619266 216 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AC124864.2-201ENST00000624736 186 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.61□□□□□ -1.35
SOX4Q06945 ZNF658B-201ENST00000602828 3408 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
SOX4Q06945 AC011369.2-201ENST00000624423 1567 ntBASIC6.61□□□□□ -1.35
SOX4Q06945 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
SOX4Q06945 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 Z83820.1-201ENST00000456978 1499 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AL669831.5-218ENST00000591702 1873 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 MAPK6PS3-201ENST00000403865 2162 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
SOX4Q06945 ENSAP3-201ENST00000312710 333 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC6.6□□□□□ -1.35
SOX4Q06945 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AC007066.1-201ENST00000392902 381 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL096829.1-201ENST00000413677 457 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AL354890.1-201ENST00000413730 346 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL050321.1-201ENST00000432363 400 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC6.6□□□□□ -1.35
SOX4Q06945 ANKRD30BP3-201ENST00000444850 1070 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC6.6□□□□□ -1.35
SOX4Q06945 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 MTCYBP18-201ENST00000501056 747 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AC104108.1-201ENST00000509930 412 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC6.6□□□□□ -1.35
SOX4Q06945 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.6□□□□□ -1.35
SOX4Q06945 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC6.6□□□□□ -1.35
SOX4Q06945 AC007956.1-201ENST00000555623 542 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 PSMB7P1-201ENST00000556349 514 ntBASIC6.6□□□□□ -1.35
SOX4Q06945 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms