Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 MIR4489-201ENST00000578869 62 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.13□□□□□ -1.75
ACTBP60709 AC130352.1-201ENST00000602979 661 ntBASIC4.13□□□□□ -1.75
ACTBP60709 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.13□□□□□ -1.75
ACTBP60709 AC009237.17-201ENST00000618111 748 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC067852.7-201ENST00000623270 535 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC021106.3-201ENST00000623925 531 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC004808.2-201ENST00000627965 773 ntBASIC4.13□□□□□ -1.75
ACTBP60709 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 OR11H5P-202ENST00000641612 1325 ntBASIC4.13□□□□□ -1.75
ACTBP60709 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
ACTBP60709 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 MTND4P26-201ENST00000415971 1359 ntBASIC4.13□□□□□ -1.75
ACTBP60709 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
ACTBP60709 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
ACTBP60709 AC012020.1-201ENST00000624541 1728 ntBASIC4.12□□□□□ -1.75
ACTBP60709 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.12□□□□□ -1.75
ACTBP60709 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
ACTBP60709 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 RNU1-108P-201ENST00000362556 161 ntBASIC4.12□□□□□ -1.75
ACTBP60709 RNU6-1331P-201ENST00000363658 106 ntBASIC4.12□□□□□ -1.75
ACTBP60709 RNA5SP28-201ENST00000363841 119 ntBASIC4.12□□□□□ -1.75
ACTBP60709 AL078604.1-201ENST00000404609 466 ntBASIC4.12□□□□□ -1.75
ACTBP60709 RPL23AP48-201ENST00000406913 488 ntBASIC4.12□□□□□ -1.75
ACTBP60709 AL451139.1-201ENST00000434718 346 ntBASIC4.12□□□□□ -1.75
ACTBP60709 AC245047.2-201ENST00000441060 530 ntBASIC4.12□□□□□ -1.75
ACTBP60709 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.12□□□□□ -1.75
ACTBP60709 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.12□□□□□ -1.75
ACTBP60709 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.12□□□□□ -1.75
ACTBP60709 AC012158.1-204ENST00000483430 465 ntBASIC4.12□□□□□ -1.75
ACTBP60709 RNU6-709P-201ENST00000517257 104 ntBASIC4.12□□□□□ -1.75
ACTBP60709 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 AC109635.6-201ENST00000525487 1113 ntBASIC4.12□□□□□ -1.75
ACTBP60709 DEFB109D-201ENST00000529497 240 ntBASIC4.12□□□□□ -1.75
ACTBP60709 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 TVP23CP2-201ENST00000571473 623 ntBASIC4.12□□□□□ -1.75
ACTBP60709 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 SLC25A36P1-201ENST00000590111 465 ntBASIC4.12□□□□□ -1.75
ACTBP60709 HMGB2P1-201ENST00000591146 634 ntBASIC4.12□□□□□ -1.75
ACTBP60709 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.12□□□□□ -1.75
ACTBP60709 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.12□□□□□ -1.75
ACTBP60709 AC011815.3-201ENST00000624194 473 ntBASIC4.12□□□□□ -1.75
ACTBP60709 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.12□□□□□ -1.75
ACTBP60709 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.12□□□□□ -1.75
ACTBP60709 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
ACTBP60709 IRF5P1-201ENST00000504852 2164 ntBASIC4.12□□□□□ -1.75
ACTBP60709 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 PABPC1P6-201ENST00000445594 1829 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC008758.3-201ENST00000507003 1829 ntBASIC4.11□□□□□ -1.75
ACTBP60709 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ACTBP60709 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.11□□□□□ -1.75
ACTBP60709 AC017104.4-201ENST00000636283 1592 ntBASIC4.11□□□□□ -1.75
ACTBP60709 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 HSPD1P14-201ENST00000432666 1618 ntBASIC4.11□□□□□ -1.75
ACTBP60709 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
ACTBP60709 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 RNU6-1279P-201ENST00000383917 103 ntBASIC4.11□□□□□ -1.75
ACTBP60709 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
ACTBP60709 Z74021.1-201ENST00000423610 407 ntBASIC4.11□□□□□ -1.75
ACTBP60709 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.11□□□□□ -1.75
ACTBP60709 ELOCP10-201ENST00000440624 327 ntBASIC4.11□□□□□ -1.75
ACTBP60709 OR7E125P-201ENST00000443450 846 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.11□□□□□ -1.75
ACTBP60709 NDUFS5P3-201ENST00000450668 321 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC079841.1-201ENST00000481228 950 ntBASIC4.11□□□□□ -1.75
ACTBP60709 AC072052.1-201ENST00000496556 306 ntBASIC4.11□□□□□ -1.75
ACTBP60709 HIGD1AP14-201ENST00000507617 282 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms