Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 AC011005.3-201ENST00000491624 395 ntBASIC4.45□□□□□ -1.7
LIM2P55344 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 RNU2-30P-201ENST00000516209 141 ntBASIC4.45□□□□□ -1.7
LIM2P55344 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 AL110118.1-201ENST00000553543 400 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC067805.1-201ENST00000559344 470 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC079075.1-201ENST00000559543 878 ntBASIC4.45□□□□□ -1.7
LIM2P55344 MTND2P13-201ENST00000577438 1039 ntBASIC4.45□□□□□ -1.7
LIM2P55344 RN7SL652P-201ENST00000577769 300 ntBASIC4.45□□□□□ -1.7
LIM2P55344 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 AC098935.2-201ENST00000604222 466 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC090953.1-201ENST00000604305 1092 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC084036.1-201ENST00000609190 508 ntBASIC4.45□□□□□ -1.7
LIM2P55344 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LIM2P55344 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
LIM2P55344 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
LIM2P55344 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
LIM2P55344 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
LIM2P55344 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 AC068870.3-201ENST00000625077 2536 ntBASIC4.44□□□□□ -1.7
LIM2P55344 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 SNORD96B-201ENST00000386148 79 ntBASIC4.44□□□□□ -1.7
LIM2P55344 RN7SKP97-201ENST00000410966 333 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AL139128.1-201ENST00000413921 941 ntBASIC4.44□□□□□ -1.7
LIM2P55344 RBMY2KP-201ENST00000418221 992 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.44□□□□□ -1.7
LIM2P55344 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.44□□□□□ -1.7
LIM2P55344 AL772161.1-201ENST00000439130 476 ntBASIC4.44□□□□□ -1.7
LIM2P55344 H2AFZP5-201ENST00000446960 382 ntBASIC4.44□□□□□ -1.7
LIM2P55344 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 SEPT7P3-201ENST00000455017 621 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.44□□□□□ -1.7
LIM2P55344 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 AC090142.1-201ENST00000465776 462 ntBASIC4.44□□□□□ -1.7
LIM2P55344 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 IGLV2-34-201ENST00000490007 283 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AC025164.1-201ENST00000496249 478 ntBASIC4.44□□□□□ -1.7
LIM2P55344 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.44□□□□□ -1.7
LIM2P55344 AC008147.3-201ENST00000548666 354 ntBASIC4.44□□□□□ -1.7
LIM2P55344 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.44□□□□□ -1.7
LIM2P55344 MIR4443-201ENST00000585052 53 ntBASIC4.44□□□□□ -1.7
LIM2P55344 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 AC007620.3-201ENST00000608131 497 ntBASIC4.44□□□□□ -1.7
LIM2P55344 SNORD91B-202ENST00000608459 222 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AC097505.1-201ENST00000610199 565 ntBASIC4.44□□□□□ -1.7
LIM2P55344 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 AC010928.1-201ENST00000592477 1447 ntBASIC4.44□□□□□ -1.7
LIM2P55344 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
LIM2P55344 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
LIM2P55344 RLIMP2-201ENST00000427891 1563 ntBASIC4.44□□□□□ -1.7
LIM2P55344 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.44□□□□□ -1.7
LIM2P55344 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
LIM2P55344 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.43□□□□□ -1.7
LIM2P55344 AL590240.1-201ENST00000334118 313 ntBASIC4.43□□□□□ -1.7
LIM2P55344 RNU6-1251P-201ENST00000364502 107 ntBASIC4.43□□□□□ -1.7
LIM2P55344 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC4.43□□□□□ -1.7
LIM2P55344 SNORD65-201ENST00000391079 73 ntBASIC4.43□□□□□ -1.7
LIM2P55344 ST13P16-201ENST00000401760 781 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AL080315.1-201ENST00000406055 466 ntBASIC4.43□□□□□ -1.7
LIM2P55344 RN7SKP267-201ENST00000410381 285 ntBASIC4.43□□□□□ -1.7
LIM2P55344 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.43□□□□□ -1.7
LIM2P55344 AC140479.3-201ENST00000418944 1126 ntBASIC4.43□□□□□ -1.7
LIM2P55344 USP9YP9-201ENST00000429406 715 ntBASIC4.43□□□□□ -1.7
LIM2P55344 MTCO1P45-201ENST00000431457 267 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC4.43□□□□□ -1.7
LIM2P55344 RPL36AP15-201ENST00000444514 266 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.43□□□□□ -1.7
LIM2P55344 Z80107.2-201ENST00000445127 392 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AC104651.2-201ENST00000447549 528 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.43□□□□□ -1.7
LIM2P55344 AC108463.1-201ENST00000450258 347 ntBASIC4.43□□□□□ -1.7
LIM2P55344 RPL23AP37-201ENST00000479658 549 ntBASIC4.43□□□□□ -1.7
LIM2P55344 RPS4XP18-201ENST00000495480 763 ntBASIC4.43□□□□□ -1.7
LIM2P55344 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.43□□□□□ -1.7
LIM2P55344 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms